- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x 3CU: CASUARINE
- 2 x GLC: alpha-D-glucopyranose(Non-covalent)
GLC.2: 14 residues within 4Å:- Chain A: R.122, F.123, Y.127, N.166, Y.172, R.175, Q.177, R.247, E.249, S.250, A.277, D.282
- Ligands: 3CU.1, SO4.3
11 PLIP interactions:11 interactions with chain A- Hydrogen bonds: A:R.122, A:R.122, A:N.166, A:N.166, A:R.175, A:R.247, A:E.249
- Water bridges: A:Q.177, A:Q.177, A:E.249, A:S.250
GLC.12: 15 residues within 4Å:- Chain B: R.122, F.123, Y.127, N.166, Y.172, R.175, Q.177, R.247, E.249, S.250, A.277, D.282, Y.482
- Ligands: 3CU.11, SO4.13
13 PLIP interactions:13 interactions with chain B- Hydrogen bonds: B:R.122, B:R.122, B:N.166, B:N.166, B:Y.172, B:R.175, B:R.247, B:E.249, B:S.250
- Water bridges: B:Q.177, B:Q.177, B:E.249, B:S.250
- 15 x SO4: SULFATE ION(Non-functional Binders)
SO4.3: 5 residues within 4Å:- Chain A: R.247, S.250, D.282, F.283
- Ligands: GLC.2
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:S.250
- Salt bridges: A:R.247
SO4.4: 4 residues within 4Å:- Chain A: L.230, Q.231, Y.360, H.365
8 PLIP interactions:8 interactions with chain A- Hydrogen bonds: A:Q.231, A:Q.231
- Water bridges: A:D.232, A:Y.348, A:Y.360, A:Y.360, A:H.365
- Salt bridges: A:H.365
SO4.5: 6 residues within 4Å:- Chain A: D.213, K.225, R.226, D.242
- Chain B: I.12, R.243
9 PLIP interactions:6 interactions with chain A, 3 interactions with chain B- Hydrogen bonds: A:D.242
- Water bridges: A:H.163, A:D.213, A:K.225, B:R.243, B:R.243
- Salt bridges: A:K.225, A:R.226, B:R.243
SO4.6: 4 residues within 4Å:- Chain A: H.143, W.144, D.145, K.146
7 PLIP interactions:7 interactions with chain A- Hydrogen bonds: A:D.145, A:D.145, A:K.146
- Water bridges: A:G.142, A:W.144, A:W.144
- Salt bridges: A:H.143
SO4.7: 2 residues within 4Å:- Chain A: H.62, N.65
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:N.65
- Salt bridges: A:H.62
SO4.8: 5 residues within 4Å:- Chain A: G.326, D.327, N.328, A.329
- Chain B: N.54
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:N.328, A:N.328, A:A.329
SO4.9: 3 residues within 4Å:- Chain A: R.368, N.369, Q.370
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:N.369, A:N.369, A:Q.370
- Water bridges: A:R.368, A:R.368
- Salt bridges: A:R.368
SO4.13: 6 residues within 4Å:- Chain B: R.247, S.250, D.282, F.283, Y.482
- Ligands: GLC.12
8 PLIP interactions:8 interactions with chain B- Hydrogen bonds: B:S.250, B:S.250, B:D.282
- Water bridges: B:R.247, B:R.247, B:D.282, B:D.282
- Salt bridges: B:R.247
SO4.14: 4 residues within 4Å:- Chain B: H.143, W.144, D.145, K.146
7 PLIP interactions:7 interactions with chain B- Hydrogen bonds: B:H.143, B:D.145, B:K.146
- Water bridges: B:W.144, B:W.144
- Salt bridges: B:H.143, B:K.146
SO4.15: 4 residues within 4Å:- Chain B: L.230, Q.231, Y.360, H.365
6 PLIP interactions:6 interactions with chain B- Hydrogen bonds: B:Q.231, B:Y.360
- Water bridges: B:Q.231, B:D.232, B:Y.348
- Salt bridges: B:H.365
SO4.16: 7 residues within 4Å:- Chain A: I.12, R.243
- Chain B: Y.210, D.213, K.225, R.226, D.242
9 PLIP interactions:6 interactions with chain B, 3 interactions with chain A- Hydrogen bonds: B:D.213
- Water bridges: B:K.225, B:K.225, B:D.242, A:R.243, A:R.243
- Salt bridges: B:K.225, B:R.226, A:R.243
SO4.17: 2 residues within 4Å:- Chain B: R.98, S.99
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:S.99
- Water bridges: B:S.99
- Salt bridges: B:R.98
SO4.18: 4 residues within 4Å:- Chain B: S.99, T.100, E.101, N.102
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:S.99, B:E.101, B:N.102, B:N.102
SO4.19: 3 residues within 4Å:- Chain B: R.368, N.369, Q.370
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:N.369, B:Q.370
- Water bridges: B:R.368, B:R.368
- Salt bridges: B:R.368
SO4.20: 3 residues within 4Å:- Chain B: E.81, G.82, K.462
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:G.82
- Water bridges: B:Q.83, B:Y.458
- 1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Cardona, F. et al., Total Syntheses of Casuarine and its 6-O-Alpha-Glucoside: Complementary Inhibition Towards Glycoside Hydrolases of the Gh31 and Gh37 Families. Chemistry (2009)
- Release Date
- 2009-01-13
- Peptides
- PERIPLASMIC TREHALASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x 3CU: CASUARINE
- 2 x GLC: alpha-D-glucopyranose(Non-covalent)
- 15 x SO4: SULFATE ION(Non-functional Binders)
- 1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Cardona, F. et al., Total Syntheses of Casuarine and its 6-O-Alpha-Glucoside: Complementary Inhibition Towards Glycoside Hydrolases of the Gh31 and Gh37 Families. Chemistry (2009)
- Release Date
- 2009-01-13
- Peptides
- PERIPLASMIC TREHALASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
D