SMTL ID : 2jk0.1 (1 other biounit)

Structural and functional insights into Erwinia carotovora L- asparaginase

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-tetramer

Ligands

4 x ASP: ASPARTIC ACID(Non-covalent)

ASP.1: 9 residues within 4Å: Chain A: G.12, T.13, G.59, S.60, E.61, G.92, T.93, D.94, A.118 14 PLIP interactions: 11 interactions with chain A, 1 interactions with chain C, 2 Ligand-Ligand interactions Hydrogen bonds: A:T.13, A:T.13, A:S.60, A:E.61, A:E.61, A:E.61, A:T.93, A:D.94, C:S.252, D.1, D.1 Water bridges: A:T.93, A:A.118 Salt bridges: A:K.166 ASP.2: 9 residues within 4Å: Chain B: G.12, T.13, G.59, S.60, E.61, G.92, T.93, D.94, A.118 12 PLIP interactions: 10 interactions with chain B, 2 Ligand-Ligand interactions Hydrogen bonds: B:T.13, B:T.13, B:S.60, B:E.61, B:E.61, B:E.61, B:T.93, B:D.94, D.2, D.2 Water bridges: B:I.14 Salt bridges: B:K.166 ASP.3: 9 residues within 4Å: Chain C: G.12, T.13, G.59, S.60, E.61, G.92, T.93, D.94, A.118 12 PLIP interactions: 9 interactions with chain C, 1 interactions with chain A, 2 Ligand-Ligand interactions Hydrogen bonds: C:T.13, C:T.13, C:S.60, C:E.61, C:T.93, C:D.94, A:S.252, D.3, D.3 Water bridges: C:I.14, C:K.166 Salt bridges: C:K.166 ASP.4: 10 residues within 4Å: Chain D: G.12, T.13, G.59, S.60, E.61, G.92, T.93, D.94, A.118, M.119 12 PLIP interactions: 2 Ligand-Ligand interactions, 10 interactions with chain D Hydrogen bonds: D.4, D.4, D:T.13, D:T.13, D:S.60, D:E.61, D:E.61, D:T.93, D:D.94, D:D.94 Water bridges: D:I.14 Salt bridges: D:K.166

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Papageorgiou, A.C. et al., Structural and Functional Insights Into Erwinia Carotovora L-Asparaginase. FEBS J. (2008)

Release Date

2008-08-05

Peptides

L-ASPARAGINASE: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

L-ASPARAGINASE

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