SMTL ID : 2lbu.1

HADDOCK calculated model of Congo red bound to the HET-s amyloid

Coordinates

PDB Format

Method

SOLID-STATE NMR

Oligo State

homo-pentamer

Ligands

1 x CGO: SODIUM 3,3'-(1E,1'E)-BIPHENYL-4,4'-DIYLBIS(DIAZENE-2,1-DIYL)BIS(4-AMINONAPHTHALENE-1-SULFONATE)(Non-covalent)

CGO.1: 19 residues within 4Å: Chain B: S.11, A.12, K.13, S.47, V.48, E.49 Chain C: S.11, A.12, K.13, S.47, V.48, E.49 Chain D: S.11, A.12, K.13, S.47, V.48, E.49 Chain E: A.12 5 PLIP interactions: 3 interactions with chain D, 1 interactions with chain C, 1 interactions with chain B Hydrophobic interactions: D:E.49 Hydrogen bonds: D:S.11, C:A.12 Salt bridges: D:K.13, B:K.13

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schutz, A.K. et al., The Amyloid-Congo Red Interface at Atomic Resolution. Angew.Chem.Int.Ed.Engl. (2011)

Release Date

2011-06-01

Peptides

Small s protein: ABCDE

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

Small s protein

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