SMTL ID : 2ml2.1

Solution Structure of AlgE6R2 subunit from the Azotobacter vinelandii Mannuronan C5-epimerase

Coordinates

PDB Format

Method

SOLUTION NMR

Oligo State

monomer

Ligands

6 x CA: CALCIUM ION(Non-covalent)

CA.1: 8 residues within 4Å: Chain A: S.12, D.13, L.14, D.16, G.29, G.31, G.32, D.34 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:S.12, A:L.14, A:D.16, A:G.31, A:D.34 CA.2: 9 residues within 4Å: Chain A: G.20, T.21, L.23, E.25, E.26, G.38, G.40, G.41, D.43 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:L.23, A:E.26, A:G.38, A:G.40, A:D.43 CA.3: 9 residues within 4Å: Chain A: G.29, G.30, G.31, G.32, D.34, G.47, G.48, A.49, D.52 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:G.30, A:D.34, A:G.47, A:A.49, A:D.52 CA.4: 9 residues within 4Å: Chain A: G.38, Y.39, G.40, G.41, D.43, G.56, E.58, G.59, D.61 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:Y.39, A:G.41, A:D.43, A:E.58, A:D.61 CA.5: 9 residues within 4Å: Chain A: G.48, G.50, R.51, D.52, L.67, D.70, S.71, S.80, D.81 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:G.48, A:G.50, A:D.52, A:D.70, A:D.81 CA.6: 7 residues within 4Å: Chain A: G.57, E.58, G.59, D.61, F.86, P.88, D.91 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:G.57, A:G.59, A:D.61, A:D.91, A:D.91

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Buchinger, E. et al., Structural and Functional Characterization of the R-modules in Alginate C-5 Epimerases AlgE4 and AlgE6 from Azotobacter vinelandii. J.Biol.Chem. (2014)

Release Date

2014-10-01

Peptides

Poly(beta-D-mannuronate) C5 epimerase 6: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Poly(beta-D-mannuronate) C5 epimerase 6