SMTL ID : 2nwa.1 (2 other biounits)

X-ray Crystal Structure of Protein ytmB from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR466

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

homo-tetramer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: E.6, K.29, R.33, K.47 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:E.6 Salt bridges: A:K.14, A:K.29, A:R.33, A:K.47 SO4.2: 3 residues within 4Å: Chain B: K.14, K.29, R.33 6 PLIP interactions: 6 interactions with chain B Water bridges: B:R.33, B:R.33 Salt bridges: B:K.14, B:K.16, B:K.29, B:R.33 SO4.3: 4 residues within 4Å: Chain C: K.14, K.16, K.29, R.33 4 PLIP interactions: 4 interactions with chain C Salt bridges: C:K.14, C:K.16, C:K.29, C:R.33 SO4.4: 4 residues within 4Å: Chain D: K.14, K.29, R.33, K.47 5 PLIP interactions: 5 interactions with chain D Salt bridges: D:K.14, D:K.16, D:K.29, D:R.33, D:K.47

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhou, W. et al., Crystal Structure of the Hypothetical protein YtmB from Bacillus subtilis subsp. (subtilis str. 168), Northeast Structural Genomics target SR466. To be Published

Release Date

2007-01-09

Peptides

Hypothetical protein ytmB: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Hypothetical protein ytmB

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