SMTL ID : 2nx8.1

The crystal structure of the tRNA-specific adenosine deaminase from Streptococcus pyogenes

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: H.65, E.67, C.95, M.97, C.98 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.65, A:C.95, A:C.98 ZN.3: 5 residues within 4Å: Chain B: H.65, E.67, C.95, M.97, C.98 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:H.65, B:C.95, B:C.98

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 4 residues within 4Å: Chain A: I.36, N.54, R.56, H.65 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:N.54, A:N.54 Water bridges: A:I.36, A:R.56, A:R.56, A:R.56, A:R.56 Salt bridges: A:R.56, A:H.65 PO4.4: 4 residues within 4Å: Chain B: I.36, N.54, R.56, H.65 9 PLIP interactions: 9 interactions with chain B Hydrogen bonds: B:N.54, B:N.54 Water bridges: B:I.36, B:R.56, B:R.56, B:R.56, B:R.56 Salt bridges: B:R.56, B:H.65

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lee, W.-H. et al., Crystal structure of the tRNA-specific adenosine deaminase from Streptococcus pyogenes. Proteins (2007)

Release Date

2007-08-21

Peptides

TRNA-specific adenosine deaminase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

TRNA-specific adenosine deaminase