SMTL ID : 2nyt.1

The APOBEC2 Crystal Structure and Functional Implications for AID

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-tetramer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: E.26, H.64, E.66, C.94, C.97 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:E.26, A:H.64, A:C.94, A:C.97 ZN.2: 4 residues within 4Å: Chain B: H.64, E.66, C.94, C.97 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:H.64, B:C.94, B:C.97 ZN.3: 5 residues within 4Å: Chain C: E.26, H.64, E.66, C.94, C.97 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:E.26, C:H.64, C:C.94, C:C.97 ZN.4: 4 residues within 4Å: Chain D: H.64, E.66, C.94, C.97 3 PLIP interactions: 3 interactions with chain D Metal complexes: D:H.64, D:C.94, D:C.97

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Prochnow, C. et al., The APOBEC-2 crystal structure and functional implications for the deaminase AID. Nature (2007)

Release Date

2007-01-09

Peptides

Probable C->U-editing enzyme APOBEC-2: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Probable C->U-editing enzyme APOBEC-2