SMTL ID : 2o4p.1

Crystal Structure of HIV-1 Protease (Q7K) in Complex with Tipranavir

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

1 x TPV: N-(3-{(1R)-1-[(6R)-4-HYDROXY-2-OXO-6-PHENETHYL-6-PROPYL-5,6-DIHYDRO-2H-PYRAN-3-YL]PROPYL}PHENYL)-5-(TRIFLUOROMETHYL)-2-PYRIDINESULFONAMIDE(Non-covalent)

TPV.1: 25 residues within 4Å: Chain A: R.8, L.23, D.25, G.27, A.28, D.29, D.30, I.47, G.48, G.49, I.50, P.81, V.82 Chain B: R.8, L.23, D.25, G.27, A.28, V.32, G.48, G.49, I.50, V.82, I.84 Ligands: GOL.2 16 PLIP interactions: 10 interactions with chain A, 6 interactions with chain B Hydrophobic interactions: A:L.23, A:A.28, A:I.50, A:P.81, A:V.82, B:A.28, B:V.32, B:I.50, B:I.50, B:I.84 Hydrogen bonds: A:D.29, A:D.30, A:G.48, A:G.48, A:I.50, B:I.50

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 7 residues within 4Å: Chain A: R.8 Chain B: G.27, A.28, D.29, I.47, G.48 Ligands: TPV.1 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:G.27, B:D.29, B:G.48 Water bridges: B:D.30

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Muzammil, S. et al., Unique thermodynamic response of tipranavir to human immunodeficiency virus type 1 protease drug resistance mutations. J.Virol. (2007)

Release Date

2006-12-12

Peptides

protease: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

protease

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