SMTL ID : 2o8t.1

Crystal Structure and Binding Epitopes of Urokinase-type Plasminogen Activator (C122A/N145Q) in complex with Inhibitors

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.45 Å

Oligo State

monomer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain A: I.36, L.122 1 PLIP interactions: 1 interactions with chain A Water bridges: A:L.122 SO4.2: 5 residues within 4Å: Chain A: H.46, Q.195, G.196, D.197, S.198 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.196, A:D.197, A:S.198, A:S.198, A:S.198 Salt bridges: A:H.46

2 x 1PE: PENTAETHYLENE GLYCOL(Non-functional Binders)

1PE.3: 1 residues within 4Å: Chain A: N.67 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.67 1PE.4: 0 residues within 4Å: (No contacts) 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.205

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.5: 6 residues within 4Å: Chain A: G.132, L.161, I.162, E.166, A.185, P.187 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhao, G. et al., Crystal Structure and Binding Epitopes of Urokinase-type Plasminogen Activator (C122A/N145Q/S195A) in complex with Inhibitors. To be Published

Release Date

2007-12-25

Peptides

Urokinase plasminogen activator: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Urokinase plasminogen activator

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