SMTL ID : 2ooy.1

Crystal structure of the adenylate sensor from AMP-activated protein kinase complexed with ATP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.88 Å

Oligo State

hetero-2-2-2-mer

Ligands

2 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)

ATP.1: 18 residues within 4Å: Chain C: R.140, Q.162, G.189, T.190, N.193, L.194, A.195, N.214, I.215, S.216, A.217, P.219, R.289, I.302, S.304, L.305, A.306, D.307 18 PLIP interactions: 18 interactions with chain C Hydrogen bonds: C:Q.162, C:T.190, C:T.190, C:A.195, C:A.195, C:S.216, C:A.217, C:A.217, C:S.304, C:L.305, C:A.306, C:D.307 Water bridges: C:S.216, C:S.216 Salt bridges: C:R.140, C:R.140, C:R.140, C:R.289 ATP.3: 19 residues within 4Å: Chain F: R.140, Q.162, G.189, T.190, L.194, A.195, N.214, I.215, S.216, A.217, V.218, P.219, H.288, R.289, I.302, S.304, L.305, A.306, D.307 17 PLIP interactions: 17 interactions with chain F Hydrogen bonds: F:Q.162, F:T.190, F:T.190, F:A.195, F:A.195, F:N.214, F:S.216, F:S.216, F:A.217, F:S.304, F:L.305, F:A.306, F:D.307 Water bridges: F:S.331 Salt bridges: F:R.140, F:R.140, F:R.289

1 x FLC: CITRATE ANION(Non-covalent)

FLC.2: 8 residues within 4Å: Chain E: E.48, D.49, Q.50 Chain F: V.55, R.141, T.161, R.164, R.286 10 PLIP interactions: 2 interactions with chain E, 8 interactions with chain F Hydrogen bonds: E:D.49, E:Q.50, F:V.55, F:R.286 Water bridges: F:R.164, F:R.164 Salt bridges: F:R.141, F:R.164, F:R.286, F:R.286

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Townley, R. et al., Crystal structures of the adenylate sensor from fission yeast AMP-activated protein kinase. Science (2007)

Release Date

2007-02-06

Peptides

SNF1-like protein kinase ssp2: AD
SPCC1919.03c protein: BE
Hypothetical protein C1556.08c in chromosome I: CF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

D
C

B
B

E
D

C
G

F
E

SNF1-like protein kinase ssp2

SPCC1919.03c protein

Hypothetical protein C1556.08c in chromosome I

Related Entries With Identical Sequence