SMTL ID : 2oqa.1 (1 other biounit)

X-ray Sequence and Crystal Structure of Luffaculin 1, a Novel Type 1 Ribosome-inactivating Protein

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

monomer

Ligands

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)

NAG.1: 6 residues within 4Å: Chain A: V.76, N.77, Y.81, F.139, H.140, Y.141 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:V.76, A:Y.141 Hydrogen bonds: A:N.77, A:F.139, A:F.139, A:F.139, A:H.140 NAG.2: 5 residues within 4Å: Chain A: N.84, E.85, S.86, K.89, T.103 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.84, A:E.85, A:S.86, A:K.89 Water bridges: A:E.85

1 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)

PG4.3: 3 residues within 4Å: Chain A: D.1, Y.47, L.49 2 PLIP interactions: 2 interactions with chain A Water bridges: A:T.48, A:T.48

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hou, X. et al., X-ray sequence and crystal structure of luffaculin 1, a novel type 1 ribosome-inactivating protein. Bmc Struct.Biol. (2007)

Release Date

2007-05-29

Peptides

Luffaculin 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Luffaculin 1

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