SMTL ID : 2oxl.1

Structure and Function of the E. coli Protein YmgB: a Protein Critical for Biofilm Formation and Acid Resistance

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

2 x BOG: octyl beta-D-glucopyranoside(Non-covalent)

BOG.1: 3 residues within 4Å: Chain A: E.54, R.58, A.61 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:E.54, A:R.58, A:A.61 Salt bridges: A:K.51 BOG.2: 4 residues within 4Å: Chain B: K.51, E.54, R.58, A.61 6 PLIP interactions: 6 interactions with chain B Hydrophobic interactions: B:E.54, B:R.58, B:A.61 Hydrogen bonds: B:K.51, B:K.51, B:R.58

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lee, J. et al., Structure and Function of the Escherichia coli Protein YmgB: A Protein Critical for Biofilm Formation and Acid-resistance. J.Mol.Biol. (2007)

Release Date

2007-10-30

Peptides

Hypothetical protein ymgB: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Hypothetical protein ymgB