- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.45 Å
- Oligo State
- homo-dimer
- Ligands
- 6 x MG: MAGNESIUM ION(Non-covalent)
- 3 x ACT: ACETATE ION(Non-functional Binders)
ACT.4: 3 residues within 4Å:- Chain A: Q.119, R.136
- Ligands: ACT.5
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:Q.119
- Salt bridges: A:R.73, A:R.136
ACT.5: 5 residues within 4Å:- Chain A: G.69, K.70, Y.71, N.72
- Ligands: ACT.4
6 PLIP interactions:6 interactions with chain A- Hydrophobic interactions: A:K.70
- Hydrogen bonds: A:K.70, A:Y.71, A:N.72, A:N.72
- Water bridges: A:R.73
ACT.10: 3 residues within 4Å:- Chain B: R.73, Q.119, R.136
9 PLIP interactions:9 interactions with chain B- Hydrophobic interactions: B:R.136
- Hydrogen bonds: B:Q.119
- Water bridges: B:K.70, B:Y.71, B:N.72, B:R.73, B:R.73
- Salt bridges: B:R.73, B:R.136
- 2 x GG3: {1-HYDROXY-3-[METHYL(4-PHENYLBUTYL)AMINO]PROPANE-1,1-DIYL}BIS(PHOSPHONIC ACID)(Non-covalent)
GG3.6: 20 residues within 4Å:- Chain A: Y.122, L.123, D.126, M.129, D.130, R.135, T.191, A.192, Q.195, K.235, T.236, Y.239, Q.275, D.278, K.292
- Chain B: N.154, L.157
- Ligands: MG.1, MG.2, MG.3
13 PLIP interactions:12 interactions with chain A, 1 interactions with chain B- Hydrophobic interactions: A:Y.122, A:Y.122, A:Y.122, A:Q.195, A:Y.239, B:L.157
- Hydrogen bonds: A:R.135, A:R.135, A:K.235, A:Q.275, A:K.292
- Water bridges: A:S.132
- Salt bridges: A:D.126
GG3.11: 20 residues within 4Å:- Chain A: N.154, L.157
- Chain B: Y.122, L.123, E.125, D.126, D.130, R.135, T.191, A.192, Q.195, K.235, T.236, Y.239, Q.275, D.278, K.292
- Ligands: MG.7, MG.8, MG.9
16 PLIP interactions:15 interactions with chain B, 1 interactions with chain A- Hydrophobic interactions: B:Y.122, B:Y.122, B:E.125, B:T.191, B:Q.195, A:L.157
- Hydrogen bonds: B:R.135, B:R.135, B:K.235, B:Y.239, B:Q.275
- Water bridges: B:D.130, B:S.132, B:D.278, B:K.292, B:D.296
- 1 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Cao, R. et al., Structures of a potent phenylalkyl bisphosphonate inhibitor bound to farnesyl and geranylgeranyl diphosphate synthases. Proteins (2008)
- Release Date
- 2008-03-04
- Peptides
- Farnesyl pyrophosphate synthase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.45 Å
- Oligo State
- homo-dimer
- Ligands
- 6 x MG: MAGNESIUM ION(Non-covalent)
- 3 x ACT: ACETATE ION(Non-functional Binders)
- 2 x GG3: {1-HYDROXY-3-[METHYL(4-PHENYLBUTYL)AMINO]PROPANE-1,1-DIYL}BIS(PHOSPHONIC ACID)(Non-covalent)
- 1 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Cao, R. et al., Structures of a potent phenylalkyl bisphosphonate inhibitor bound to farnesyl and geranylgeranyl diphosphate synthases. Proteins (2008)
- Release Date
- 2008-03-04
- Peptides
- Farnesyl pyrophosphate synthase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B