SMTL ID : 2p5u.2 (1 other biounit)

Crystal structure of Thermus thermophilus HB8 UDP-glucose 4-epimerase complex with NAD

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.37 Å

Oligo State

homo-dimer

Ligands

2 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.1: 31 residues within 4Å: Chain A: G.7, A.9, G.10, F.11, I.12, G.13, D.31, N.32, L.33, A.34, T.35, G.36, V.50, D.51, L.52, Q.73, A.74, A.75, A.77, V.92, A.115, S.116, T.117, Y.143, K.147, Y.170, G.171, V.173, G.182, E.183, A.184 23 PLIP interactions: 23 interactions with chain A Hydrophobic interactions: A:Y.170 Hydrogen bonds: A:A.9, A:F.11, A:I.12, A:G.13, A:N.32, A:N.32, A:A.34, A:T.35, A:T.35, A:T.35, A:G.36, A:D.51, A:L.52, A:Q.73, A:A.75, A:Y.143, A:K.147, A:V.173, A:V.173, A:E.183, A:A.184 Water bridges: A:G.10 NAD.2: 31 residues within 4Å: Chain B: T.6, G.7, A.9, G.10, F.11, I.12, G.13, D.31, N.32, L.33, A.34, T.35, G.36, V.50, D.51, L.52, Q.73, A.74, A.75, A.77, V.92, A.115, S.116, Y.143, K.147, Y.170, G.171, V.173, D.179, E.183, A.184 22 PLIP interactions: 22 interactions with chain B Hydrophobic interactions: B:Y.170, B:E.183 Hydrogen bonds: B:A.9, B:F.11, B:I.12, B:G.13, B:N.32, B:N.32, B:A.34, B:T.35, B:G.36, B:D.51, B:L.52, B:Q.73, B:Y.143, B:K.147, B:V.173, B:V.173, B:D.179, B:A.184 Water bridges: B:G.10, B:G.182

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fu, Z.-Q. et al., Crystal structure of Thermus thermophilus HB8 UDP-glucose 4-epimerase complex with NAD. To be Published

Release Date

2007-04-17

Peptides

UDP-glucose 4-epimerase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

UDP-glucose 4-epimerase

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