SMTL ID : 2p73.1

crystal structure of a glycosyltransferase involved in the glycosylation of the major capsid of PBCV-1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 4 residues within 4Å: Chain A: D.80, D.82, H.195 Ligands: UDP.2 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.80, A:D.82, A:D.82, A:H.195

1 x UDP: URIDINE-5'-DIPHOSPHATE(Non-covalent)

UDP.2: 15 residues within 4Å: Chain A: G.13, H.14, F.15, L.55, H.56, R.59, W.78, D.80, S.81, D.82, H.195, C.197, G.198, R.204 Ligands: MN.1 14 PLIP interactions: 14 interactions with chain A Hydrogen bonds: A:F.15, A:F.15, A:R.59, A:S.81, A:S.81, A:D.82, A:G.198 Water bridges: A:H.14, A:Y.21 Salt bridges: A:H.56, A:H.56, A:H.195, A:R.204, A:R.204

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, Y. et al., Structure and function of a chlorella virus-encoded glycosyltransferase. Structure (2007)

Release Date

2007-08-21

Peptides

Putative glycosyltransferase (Mannosyltransferase) involved in glycosylating the PBCV-1 major capsid protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Putative glycosyltransferase (Mannosyltransferase) involved in glycosylating the PBCV-1 major capsid protein

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