SMTL ID : 2p9w.1

Crystal Structure of the Major Malassezia sympodialis Allergen Mala s 1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.35 Å

Oligo State

monomer

Ligands

5 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: R.206, A.207, I.225, F.229, L.232 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:A.207 Water bridges: A:L.208, A:V.223, A:G.230 SO4.2: 4 residues within 4Å: Chain A: Q.94, S.95, S.96, H.97 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.94, A:S.96, A:H.97 Salt bridges: A:H.97 SO4.3: 3 residues within 4Å: Chain A: N.12, K.34, H.310 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.12 Water bridges: A:K.11 Salt bridges: A:K.11, A:K.34, A:H.310 SO4.4: 3 residues within 4Å: Chain A: H.97, E.129, R.135 4 PLIP interactions: 4 interactions with chain A Water bridges: A:S.96, A:S.96, A:H.97 Salt bridges: A:H.97 SO4.5: 5 residues within 4Å: Chain A: S.57, N.58, G.59, D.60, G.61 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.58, A:D.60

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.6: 6 residues within 4Å: Chain A: K.84, N.85, S.88, S.100, G.138, V.139 Ligand excluded by PLIP

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.7: 7 residues within 4Å: Chain A: F.174, A.175, W.176, Y.217, A.218, W.219, P.220 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:W.176, A:W.176 GOL.8: 4 residues within 4Å: Chain A: Q.64, K.84, A.86, N.90 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.64, A:Q.64, A:K.84, A:K.84 GOL.9: 5 residues within 4Å: Chain A: N.270, I.271, K.272, F.328, H.329 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.270, A:I.271, A:K.272, A:H.329 Water bridges: A:I.271

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vilhelmsson, M. et al., Crystal Structure of the Major Malassezia sympodialis Allergen Mala s 1 Reveals a beta-Propeller Fold: A Novel Fold Among Allergens. J.Mol.Biol. (2007)

Release Date

2007-05-29

Peptides

Mal s 1 allergenic protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mal s 1 allergenic protein