SMTL ID : 2pcd.1

STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE FROM PSEUDOMONAS AERUGINOSA AT 2.15 ANGSTROMS RESOLUTION

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

hetero-12-12-mer

Ligands

12 x FE: FE (III) ION(Non-covalent)

FE.1: 4 residues within 4Å: Chain B: Y.108, Y.147, H.160, H.162 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:Y.108, B:Y.147, B:H.160, B:H.162, H2O.9 FE.2: 4 residues within 4Å: Chain D: Y.108, Y.147, H.160, H.162 5 PLIP interactions: 4 interactions with chain D, 1 Ligand-Water interactions Metal complexes: D:Y.108, D:Y.147, D:H.160, D:H.162, H2O.18 FE.3: 4 residues within 4Å: Chain F: Y.108, Y.147, H.160, H.162 5 PLIP interactions: 4 interactions with chain F, 1 Ligand-Water interactions Metal complexes: F:Y.108, F:Y.147, F:H.160, F:H.162, H2O.28 FE.4: 4 residues within 4Å: Chain H: Y.108, Y.147, H.160, H.162 5 PLIP interactions: 4 interactions with chain H, 1 Ligand-Water interactions Metal complexes: H:Y.108, H:Y.147, H:H.160, H:H.162, H2O.37 FE.5: 4 residues within 4Å: Chain J: Y.108, Y.147, H.160, H.162 5 PLIP interactions: 4 interactions with chain J, 1 Ligand-Water interactions Metal complexes: J:Y.108, J:Y.147, J:H.160, J:H.162, H2O.46 FE.6: 4 residues within 4Å: Chain L: Y.108, Y.147, H.160, H.162 5 PLIP interactions: 4 interactions with chain L, 1 Ligand-Water interactions Metal complexes: L:Y.108, L:Y.147, L:H.160, L:H.162, H2O.55 FE.7: 4 residues within 4Å: Chain N: Y.108, Y.147, H.160, H.162 5 PLIP interactions: 4 interactions with chain N, 1 Ligand-Water interactions Metal complexes: N:Y.108, N:Y.147, N:H.160, N:H.162, H2O.64 FE.8: 4 residues within 4Å: Chain P: Y.108, Y.147, H.160, H.162 5 PLIP interactions: 4 interactions with chain P, 1 Ligand-Water interactions Metal complexes: P:Y.108, P:Y.147, P:H.160, P:H.162, H2O.74 FE.9: 4 residues within 4Å: Chain R: Y.108, Y.147, H.160, H.162 5 PLIP interactions: 4 interactions with chain R, 1 Ligand-Water interactions Metal complexes: R:Y.108, R:Y.147, R:H.160, R:H.162, H2O.83 FE.10: 4 residues within 4Å: Chain T: Y.108, Y.147, H.160, H.162 5 PLIP interactions: 4 interactions with chain T, 1 Ligand-Water interactions Metal complexes: T:Y.108, T:Y.147, T:H.160, T:H.162, H2O.92 FE.11: 4 residues within 4Å: Chain V: Y.108, Y.147, H.160, H.162 5 PLIP interactions: 4 interactions with chain V, 1 Ligand-Water interactions Metal complexes: V:Y.108, V:Y.147, V:H.160, V:H.162, H2O.101 FE.12: 4 residues within 4Å: Chain X: Y.108, Y.147, H.160, H.162 5 PLIP interactions: 4 interactions with chain X, 1 Ligand-Water interactions Metal complexes: X:Y.108, X:Y.147, X:H.160, X:H.162, H2O.110

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ohlendorf, D.H. et al., Structure of protocatechuate 3,4-dioxygenase from Pseudomonas aeruginosa at 2.15 A resolution. J.Mol.Biol. (1994)

Release Date

1994-12-20

Peptides

PROTOCATECHUATE 3,4-DIOXYGENASE (ALPHA CHAIN): ACEGIKMOQSUW
PROTOCATECHUATE 3,4-DIOXYGENASE (BETA CHAIN): BDFHJLNPRTVX

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
B

E
C

G
D

I
E

K
F

M
A

O
B

Q
C

S
D

U
E

W
F

B
M

D
N

F
O

H
P

J
Q

L
R

N
M

P
N

R
O

T
P

V
Q

X
R

PROTOCATECHUATE 3,4-DIOXYGENASE (ALPHA CHAIN)

PROTOCATECHUATE 3,4-DIOXYGENASE (BETA CHAIN)

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