SMTL ID : 2q42.1 (1 other biounit)

Ensemble refinement of the protein crystal structure of glyoxalase II from Arabidopsis thaliana gene At2g31350

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.74 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain A: H.54, H.56, H.59, H.112, D.131 Ligands: FE.2 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.54, A:H.56, A:H.112, A:D.131, H2O.1

1 x FE: FE (III) ION(Non-covalent)

FE.2: 5 residues within 4Å: Chain A: D.58, H.59, D.131, H.169 Ligands: ZN.1 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.58, A:H.59, A:D.131, A:H.169, H2O.1

1 x ACY: ACETIC ACID(Non-functional Binders)

ACY.3: 7 residues within 4Å: Chain A: F.134, S.137, C.138, K.140, N.175, R.248, K.251 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:F.134 Water bridges: A:K.140, A:R.248 Salt bridges: A:K.140, A:R.248, A:K.251

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.4: 3 residues within 4Å: Chain A: L.199, K.202, L.204 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.202

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Levin, E.J. et al., Ensemble refinement of protein crystal structures: validation and application. Structure (2007)

Release Date

2007-06-19

Peptides

Putative hydroxyacylglutathione hydrolase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Putative hydroxyacylglutathione hydrolase 2

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