SMTL ID : 2q6b.1

Design and synthesis of novel, conformationally restricted HMG-COA reductase inhibitors

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-tetramer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: M.221, G.222, M.223, N.224 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:M.221, A:G.222, A:M.223, A:N.224, A:N.224, A:M.225 SO4.4: 5 residues within 4Å: Chain B: A.220, M.221, G.222, M.223, N.224 8 PLIP interactions: 8 interactions with chain B Hydrogen bonds: B:M.221, B:G.222, B:M.223, B:N.224, B:N.224 Water bridges: B:M.225, B:G.373, B:G.373 SO4.5: 5 residues within 4Å: Chain C: A.220, M.221, G.222, M.223, N.224 7 PLIP interactions: 7 interactions with chain C Hydrogen bonds: C:M.221, C:G.222, C:M.223, C:N.224, C:N.224 Water bridges: C:M.225, C:M.225 SO4.7: 5 residues within 4Å: Chain D: A.220, M.221, G.222, M.223, N.224 7 PLIP interactions: 7 interactions with chain D Hydrogen bonds: D:M.221, D:G.222, D:M.223, D:N.224, D:N.224 Water bridges: D:M.225, D:G.373

4 x HR2: (3R,5R)-7-[3-(4-FLUOROPHENYL)-1-ISOPROPYL-8-OXO-7-PHENYL-1,4,5,6,7,8-HEXAHYDROPYRROLO[2,3-C]AZEPIN-2-YL]-3,5-DIHYDROXYHEPTANOIC ACID(Non-covalent)

HR2.2: 24 residues within 4Å: Chain A: R.156, M.223, S.227, V.249, S.250, N.252, D.256, K.257, K.258 Chain B: E.125, G.126, C.127, L.128, S.131, R.134, K.301, A.317, H.318, N.321, L.419, A.422, H.427, L.428, V.429 14 PLIP interactions: 6 interactions with chain B, 8 interactions with chain A Hydrophobic interactions: B:L.419, B:A.422, A:V.249 Hydrogen bonds: B:E.125, B:S.131, B:N.321, A:R.156, A:R.156, A:S.250 Salt bridges: B:K.301, A:R.156, A:K.258 Water bridges: A:S.250, A:N.252 HR2.3: 24 residues within 4Å: Chain A: E.125, G.126, C.127, L.128, S.131, R.134, K.301, A.317, H.318, N.321, L.419, A.422, H.427, L.428, K.430 Chain B: R.156, M.223, S.227, V.249, S.250, N.252, D.256, K.257, K.258 16 PLIP interactions: 7 interactions with chain A, 9 interactions with chain B Hydrophobic interactions: A:L.419, A:A.422, B:V.249 Hydrogen bonds: A:E.125, A:S.131, A:N.321, B:R.156, B:R.156, B:S.250, B:D.256 Salt bridges: A:K.301, B:R.156, B:K.258 pi-Cation interactions: A:K.430 Water bridges: B:S.250, B:K.258 HR2.6: 24 residues within 4Å: Chain C: E.125, G.126, C.127, L.128, S.131, R.134, K.301, A.317, H.318, N.321, L.419, A.422, H.427, L.428, V.429 Chain D: R.156, M.223, S.227, V.249, S.250, N.252, D.256, K.257, K.258 15 PLIP interactions: 6 interactions with chain C, 9 interactions with chain D Hydrophobic interactions: C:L.419, C:A.422, D:V.249 Hydrogen bonds: C:E.125, C:S.131, C:N.321, D:R.156, D:R.156, D:S.250, D:D.256 Salt bridges: C:K.301, D:R.156, D:K.258 Water bridges: D:S.250, D:N.252 HR2.8: 25 residues within 4Å: Chain C: R.156, S.227, V.249, S.250, N.252, D.256, K.257, K.258 Chain D: E.125, G.126, C.127, L.128, S.131, R.134, K.301, A.317, H.318, N.321, S.418, L.419, A.422, L.423, H.427, L.428, K.430 14 PLIP interactions: 8 interactions with chain C, 6 interactions with chain D Hydrophobic interactions: C:V.249, D:L.419, D:L.423 Hydrogen bonds: C:R.156, C:R.156, C:S.250, D:E.125, D:S.131, D:N.321 Water bridges: C:S.250, C:K.258 Salt bridges: C:R.156, C:K.258, D:K.301

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pfefferkorn, J.A. et al., Design and synthesis of novel, conformationally restricted HMG-CoA reductase inhibitors. Bioorg.Med.Chem.Lett. (2007)

Release Date

2007-07-17

Peptides

3-hydroxy-3-methylglutaryl-coenzyme A reductase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

3-hydroxy-3-methylglutaryl-coenzyme A reductase

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