SMTL ID : 2qdd.1

Crystal structure of a member of enolase superfamily from Roseovarius nubinhibens ISM

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-octamer

Ligands

8 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: P.61, G.99, H.100 Chain B: P.61, G.99, H.100 5 PLIP interactions: 2 interactions with chain B, 3 interactions with chain A Hydrogen bonds: B:H.100, A:H.100, A:H.100 Water bridges: B:S.101, A:S.101 GOL.2: 10 residues within 4Å: Chain B: P.203, D.227, Q.228, H.231 Chain F: W.256, C.261, E.262, V.287, G.288, W.289 6 PLIP interactions: 3 interactions with chain B, 3 interactions with chain F Hydrogen bonds: B:H.231, F:W.256, F:G.288 Water bridges: B:H.231, B:H.231, F:C.261 GOL.3: 6 residues within 4Å: Chain C: P.61, G.99, H.100 Chain D: P.61, G.99, H.100 5 PLIP interactions: 3 interactions with chain C, 2 interactions with chain D Hydrogen bonds: C:H.100, C:H.100, D:H.100 Water bridges: C:S.101, D:S.101 GOL.4: 10 residues within 4Å: Chain D: P.203, D.227, Q.228, H.231 Chain H: W.256, C.261, E.262, V.287, G.288, W.289 6 PLIP interactions: 3 interactions with chain D, 3 interactions with chain H Hydrogen bonds: D:H.231, H:W.256, H:G.288 Water bridges: D:H.231, D:H.231, H:C.261 GOL.5: 6 residues within 4Å: Chain E: P.61, G.99, H.100 Chain F: P.61, G.99, H.100 5 PLIP interactions: 3 interactions with chain E, 2 interactions with chain F Hydrogen bonds: E:H.100, E:H.100, F:H.100 Water bridges: E:S.101, F:S.101 GOL.6: 10 residues within 4Å: Chain D: W.256, C.261, E.262, V.287, G.288, W.289 Chain F: P.203, D.227, Q.228, H.231 6 PLIP interactions: 3 interactions with chain D, 3 interactions with chain F Hydrogen bonds: D:W.256, D:G.288, F:H.231 Water bridges: D:C.261, F:H.231, F:H.231 GOL.7: 6 residues within 4Å: Chain G: P.61, G.99, H.100 Chain H: P.61, G.99, H.100 5 PLIP interactions: 3 interactions with chain G, 2 interactions with chain H Hydrogen bonds: G:H.100, G:H.100, H:H.100 Water bridges: G:S.101, H:S.101 GOL.8: 10 residues within 4Å: Chain B: W.256, C.261, E.262, V.287, G.288, W.289 Chain H: P.203, D.227, Q.228, H.231 6 PLIP interactions: 3 interactions with chain B, 3 interactions with chain H Hydrogen bonds: B:W.256, B:G.288, H:H.231 Water bridges: B:C.261, H:H.231, H:H.231

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Patskovsky, Y. et al., Crystal structure of a member of enolase superfamily from Roseovarius nubinhibens ISM. To be Published

Release Date

2007-06-26

Peptides

Mandelate racemase/muconate lactonizing enzyme: ABCDEFGH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

E
A

F
B

G
A

H
B

Mandelate racemase/muconate lactonizing enzyme

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