- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.85 Å
- Oligo State
- homo-dimer
- Ligands
- 10 x BOG: octyl beta-D-glucopyranoside(Non-covalent)
- 4 x NA: SODIUM ION(Non-functional Binders)
NA.6: 6 residues within 4Å:- Chain A: G.20, V.23, G.24, A.351, T.354, S.355
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:T.354
NA.7: 7 residues within 4Å:- Chain A: A.22, V.23, G.24, N.27, T.254, N.286
- Ligands: ALA.8
6 PLIP interactions:4 interactions with chain A, 2 Ligand-Ligand interactions- Hydrogen bonds: A:G.24, A:N.27, A:N.286, A:N.286, A.8, A.8
NA.16: 6 residues within 4Å:- Chain B: G.20, V.23, G.24, A.351, T.354, S.355
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:A.351, B:T.354
NA.17: 7 residues within 4Å:- Chain B: A.22, V.23, G.24, N.27, T.254, N.286
- Ligands: ALA.18
7 PLIP interactions:2 Ligand-Ligand interactions, 5 interactions with chain B- Hydrogen bonds: A.18, A.18, B:G.24, B:N.27, B:N.27, B:T.254, B:N.286
- 2 x ALA: ALANINE(Non-covalent)
ALA.8: 12 residues within 4Å:- Chain A: N.21, A.22, G.24, L.25, G.26, N.27, Y.108, F.253, T.254, S.256, S.355
- Ligands: NA.7
8 PLIP interactions:7 interactions with chain A, 1 Ligand-Ligand interactions- Hydrophobic interactions: A:F.253
- Hydrogen bonds: A:G.24, A:G.26, A:N.27, A:T.254, A:S.256, A:S.256, A.8
ALA.18: 12 residues within 4Å:- Chain B: N.21, A.22, G.24, L.25, G.26, N.27, Y.108, F.253, T.254, S.256, S.355
- Ligands: NA.17
10 PLIP interactions:9 interactions with chain B, 1 Ligand-Ligand interactions- Hydrophobic interactions: B:F.253
- Hydrogen bonds: B:G.24, B:G.26, B:N.27, B:Y.108, B:T.254, B:T.254, B:S.256, B:S.256, A.18
- 4 x CXX: 3-(3-CHLORO-5H-DIBENZO[B,F]AZEPIN-5-YL)-N,N-DIMETHYLPROPAN-1-AMINE(Non-covalent)
CXX.9: 13 residues within 4Å:- Chain A: L.25, L.29, R.30, V.33, Q.34, Y.107, I.111, F.253, A.319, F.320, L.400, D.401, D.404
11 PLIP interactions:11 interactions with chain A- Hydrophobic interactions: A:L.25, A:L.29, A:R.30, A:V.33, A:V.33, A:Y.107, A:I.111, A:F.253, A:F.320, A:L.400
- Salt bridges: A:D.401
CXX.10: 8 residues within 4Å:- Chain A: S.181, R.185, K.189, G.190, R.193, F.194, I.197, F.350
8 PLIP interactions:8 interactions with chain A- Hydrophobic interactions: A:R.193, A:R.193, A:F.194, A:I.197
- Hydrogen bonds: A:R.185
- pi-Stacking: A:F.194, A:F.194
- pi-Cation interactions: A:R.193
CXX.19: 13 residues within 4Å:- Chain B: L.25, L.29, R.30, V.33, Q.34, Y.107, I.111, F.253, A.319, F.320, L.400, D.401, D.404
11 PLIP interactions:11 interactions with chain B- Hydrophobic interactions: B:L.25, B:L.29, B:R.30, B:V.33, B:V.33, B:Y.107, B:I.111, B:F.253, B:F.320, B:L.400
- Salt bridges: B:D.401
CXX.20: 8 residues within 4Å:- Chain B: S.181, R.185, K.189, G.190, R.193, F.194, I.197, F.350
8 PLIP interactions:8 interactions with chain B- Hydrophobic interactions: B:R.193, B:R.193, B:F.194, B:I.197
- Hydrogen bonds: B:R.185
- pi-Stacking: B:F.194, B:F.194
- pi-Cation interactions: B:R.193
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Singh, S.K. et al., Antidepressant binding site in a bacterial homologue of neurotransmitter transporters. Nature (2007)
- Release Date
- 2007-08-21
- Peptides
- Transporter: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.85 Å
- Oligo State
- homo-dimer
- Ligands
- 10 x BOG: octyl beta-D-glucopyranoside(Non-covalent)
- 4 x NA: SODIUM ION(Non-functional Binders)
- 2 x ALA: ALANINE(Non-covalent)
- 4 x CXX: 3-(3-CHLORO-5H-DIBENZO[B,F]AZEPIN-5-YL)-N,N-DIMETHYLPROPAN-1-AMINE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Singh, S.K. et al., Antidepressant binding site in a bacterial homologue of neurotransmitter transporters. Nature (2007)
- Release Date
- 2007-08-21
- Peptides
- Transporter: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A - Membrane
-
We predict this structure to be a membrane protein.