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SMTL ID : 2qn3.1
Glycogen Phosphorylase in complex with N-4-chlorobenzoyl-N-beta-D-glucopyranosyl urea
Coordinates
PDB Format
Compare
Method
X-RAY DIFFRACTION 1.96 Å
Oligo State
homo-dimer
Ligands
2 x
F55
:
N-{[(4-chlorophenyl)carbonyl]carbamoyl}-beta-D-glucopyranosylamine
(Non-covalent)
F55.1:
17 residues within 4Å:
Chain A:
E.88
,
N.133
,
G.135
,
L.136
,
L.139
,
N.282
,
D.283
,
H.341
,
H.377
,
V.455
,
N.484
,
Y.573
,
E.672
,
A.673
,
S.674
,
G.675
,
T.676
16
PLIP interactions
:
16 interactions with chain A
Hydrophobic interactions:
A:D.283
Hydrogen bonds:
A:G.135
,
A:L.136
,
A:N.484
,
A:N.484
,
A:Y.573
,
A:E.672
,
A:A.673
,
A:S.674
,
A:G.675
Water bridges:
A:N.133
,
A:G.137
,
A:H.377
,
A:T.378
,
A:Y.573
,
A:T.676
F55.2:
17 residues within 4Å:
Chain B:
E.88
,
N.133
,
G.135
,
L.136
,
L.139
,
N.282
,
D.283
,
H.341
,
H.377
,
V.455
,
N.484
,
Y.573
,
E.672
,
A.673
,
S.674
,
G.675
,
T.676
18
PLIP interactions
:
18 interactions with chain B
Hydrophobic interactions:
B:D.283
Hydrogen bonds:
B:G.135
,
B:L.136
,
B:H.377
,
B:N.484
,
B:N.484
,
B:A.673
,
B:S.674
,
B:G.675
Water bridges:
B:N.133
,
B:G.137
,
B:D.283
,
B:H.377
,
B:T.378
,
B:Y.573
,
B:Y.573
,
B:Y.573
,
B:T.676
Links
RCSB
PDBe
PDBe-KB
PDBj
PDBsum
CATH
PLIP
Citation
Nagy, V. et al., N-(4-substituted-benzoyl)-N'-(beta-D-glucopyranosyl)ureas, inhibitors of glycogen phosphorylase: synthesis, kinetic and crystallographic evaluation. To be Published
Release Date
2008-07-22
Peptides
Glycogen phosphorylase, muscle form:
A
B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
A
Export Alignment
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PNG Image
Secondary Structure
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Glycogen phosphorylase, muscle form
Toggle Identical (AB)
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