SMTL ID : 2r9b.1 (1 other biounit)

Structural Analysis of Plasmepsin 2 from Plasmodium falciparum complexed with a peptide-based inhibitor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

monomer

Ligands

1 x LYS- PRO- PHE- SER- DCL- LEU- GLN- PHE: peptide-based inhibitor(Non-covalent)

LYS-PRO-PHE-SER-DCL-LEU-GLN-PHE.1: 25 residues within 4Å: Chain A: M.15, I.32, D.34, G.36, S.37, A.38, N.39, M.75, N.76, Y.77, V.78, S.79, F.111, T.114, S.118, I.123, L.131, Y.192, I.212, D.214, G.216, T.217, S.218, I.290, F.294 25 PLIP interactions: 25 interactions with chain A Hydrophobic interactions: A:M.15, A:I.32, A:Y.77, A:V.78, A:V.78, A:F.111, A:T.114, A:I.123, A:L.131, A:Y.192, A:I.212, A:I.290, A:F.294 Hydrogen bonds: A:G.36, A:A.38, A:N.76, A:V.78, A:S.79, A:S.79, A:S.79, A:Y.192, A:G.216, A:S.218 Water bridges: A:T.217, A:T.217

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, P. et al., Recombinant plasmepsin 1 from the human malaria parasite plasmodium falciparum: enzymatic characterization, active site inhibitor design, and structural analysis. Biochemistry (2009)

Release Date

2007-11-27

Peptides

Plasmepsin-2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Plasmepsin-2

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