SMTL ID : 2r9v.1

Crystal structure of ATP synthase subunit alpha (TM1612) from Thermotoga maritima at 2.10 A resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 3 residues within 4Å: Chain A: T.189, D.274 Ligands: ATP.3 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:T.189, H2O.2, H2O.7, H2O.12

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 3 residues within 4Å: Chain A: L.64, R.106, E.109 Ligand excluded by PLIP

1 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)

ATP.3: 14 residues within 4Å: Chain A: D.183, R.184, Q.185, T.186, G.187, K.188, T.189, A.190, F.362, R.367, P.368, Q.435, Q.437 Ligands: MG.1 20 PLIP interactions: 20 interactions with chain A Hydrogen bonds: A:Q.185, A:Q.185, A:T.186, A:G.187, A:K.188, A:T.189, A:A.190, A:E.333, A:Q.435, A:Q.437, A:Q.437 Water bridges: A:K.188, A:K.188, A:K.188, A:T.189, A:D.275, A:D.275, A:Y.438 Salt bridges: A:K.188, A:K.188

1 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)

PG4.4: 5 residues within 4Å: Chain A: K.200, G.203, Y.205, E.232, Y.233 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:K.200, A:K.200, A:G.201 Water bridges: A:R.174, A:G.201, A:G.203, A:G.203, A:V.204

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of ATP synthase subunit alpha (TM1612) from Thermotoga maritima at 2.10 A resolution. To be published

Release Date

2007-10-02

Peptides

ATP synthase subunit alpha: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

ATP synthase subunit alpha