SMTL ID : 2rd2.1

Glutaminyl-tRNA synthetase mutant C229R with bound analog 5'-O-[N-(L-GLUTAMINYL)-SULFAMOYL]ADENOSINE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 7 residues within 4Å: Chain B: H.41, H.44, R.261, M.269, S.270, K.271 Ligands: QSI.3 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:K.271 Salt bridges: B:H.41, B:H.44, B:R.261, B:K.271 SO4.2: 5 residues within 4Å: Chain B: V.268, M.269, S.270, K.273, G.483 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:M.269 Salt bridges: B:K.273

1 x QSI: 5'-O-[N-(L-GLUTAMINYL)-SULFAMOYL]ADENOSINE(Non-covalent)

QSI.3: 23 residues within 4Å: Chain A: A.75 Chain B: R.31, F.32, P.33, P.34, E.35, H.41, G.43, H.44, K.46, S.47, D.67, Y.212, H.216, R.230, T.231, F.234, F.259, R.261, L.262, M.269, K.271 Ligands: SO4.1 19 PLIP interactions: 19 interactions with chain B Hydrophobic interactions: B:P.33, B:Y.212, B:F.234 Hydrogen bonds: B:R.31, B:R.31, B:P.33, B:P.33, B:E.35, B:S.47, B:D.67, B:Y.212, B:Y.212, B:T.231, B:T.231, B:R.261, B:L.262, B:L.262 Salt bridges: B:H.44, B:K.271

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bullock, T.L. et al., A rationally engineered misacylating aminoacyl-tRNA synthetase. Proc.Natl.Acad.Sci.Usa (2008)

Release Date

2008-01-15

Peptides

Glutaminyl-tRNA synthetase: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

B
A

Glutaminyl-tRNA synthetase

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