SMTL ID : 2rjp.1 (3 other biounits)

Crystal structure of ADAMTS4 with inhibitor bound

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.149, H.153, H.159 Ligands: 886.5 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.149, A:H.153, A:H.159

3 x CA: CALCIUM ION(Non-covalent)

CA.2: 5 residues within 4Å: Chain A: D.108, L.109, C.115, T.117, E.137 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.108, A:L.109, A:C.115, A:T.117, A:E.137 CA.3: 5 residues within 4Å: Chain A: E.9, D.92, D.99, C.211, D.214 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.9, A:D.92, A:D.99, A:C.211, A:D.214 CA.4: 3 residues within 4Å: Chain A: E.9, D.92, D.214 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.9, A:D.92, A:D.92, A:D.214, H2O.1

1 x 886: N-({4'-[(4-isobutyrylphenoxy)methyl]biphenyl-4-yl}sulfonyl)-D-valine(Non-covalent)

886.5: 20 residues within 4Å: Chain A: A.36, A.40, T.117, L.118, G.119, M.120, F.145, T.146, H.149, Q.150, H.153, H.159, V.178, A.180, P.181, V.182, M.183, V.186, P.191 Ligands: ZN.1 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:A.40, A:T.117, A:H.149, A:V.178, A:V.186, A:P.191 Hydrogen bonds: A:L.118, A:G.119, A:Q.150 Salt bridges: A:H.149, A:H.153, A:H.159 pi-Stacking: A:F.145, A:H.149

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mosyak, L. et al., Crystal structures of the two major aggrecan degrading enzymes, ADAMTS4 and ADAMTS5. Protein Sci. (2008)

Release Date

2007-12-11

Peptides

ADAMTS-4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

ADAMTS-4

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