SMTL ID : 2vou.1 (1 other biounit)

STRUCTURE OF 2,6-DIHYDROXYPYRIDINE-3-HYDROXYLASE FROM ARTHROBACTER NICOTINOVORANS

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

homo-dimer

Ligands

2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 33 residues within 4Å: Chain A: V.11, G.12, S.14, I.15, S.16, Y.34, E.35, R.36, L.41, G.47, I.48, V.49, Y.98, K.118, C.119, L.120, A.148, D.149, G.150, V.154, R.173, Q.222, G.305, D.306, P.313, A.316, A.317, G.318, G.319, A.320, A.322 Ligands: GOL.2, ACT.3 24 PLIP interactions: 24 interactions with chain A Hydrophobic interactions: A:P.313 Hydrogen bonds: A:G.13, A:S.14, A:S.16, A:S.16, A:S.16, A:R.36, A:V.49, A:V.49, A:Y.98, A:Y.98, A:L.120, A:L.120, A:D.306, A:G.319, A:A.320 Water bridges: A:S.14, A:G.17, A:G.150, A:G.151, A:G.151, A:V.154, A:V.154, A:A.307 FAD.4: 33 residues within 4Å: Chain B: V.11, G.12, S.14, I.15, S.16, Y.34, E.35, R.36, L.41, G.47, I.48, V.49, Y.98, K.118, C.119, L.120, A.148, D.149, G.150, V.154, R.173, Q.222, G.305, D.306, P.313, A.316, A.317, G.318, G.319, A.320, A.322 Ligands: GOL.5, ACT.6 24 PLIP interactions: 24 interactions with chain B Hydrophobic interactions: B:P.313 Hydrogen bonds: B:G.13, B:S.14, B:S.16, B:S.16, B:S.16, B:R.36, B:V.49, B:V.49, B:Y.98, B:L.120, B:L.120, B:D.306, B:G.319, B:A.320 Water bridges: B:S.14, B:G.17, B:G.150, B:G.151, B:G.151, B:V.154, B:V.154, B:D.306, B:A.307

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 8 residues within 4Å: Chain A: G.47, I.204, Y.206, Q.222, Y.224, P.313, A.316 Ligands: FAD.1 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.222 Water bridges: A:Y.224, A:H.314 GOL.5: 8 residues within 4Å: Chain B: G.47, I.204, Y.206, Q.222, Y.224, P.313, A.316 Ligands: FAD.4 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:Y.206, B:Q.222, B:Y.224 Water bridges: B:Y.224, B:H.314

2 x ACT: ACETATE ION(Non-functional Binders)

ACT.3: 8 residues within 4Å: Chain A: P.311, R.312, P.313, A.316, A.317, G.318, Y.357 Ligands: FAD.1 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:P.311 Hydrogen bonds: A:A.316, A:A.317, A:G.318 ACT.6: 8 residues within 4Å: Chain B: P.311, R.312, P.313, A.316, A.317, G.318, Y.357 Ligands: FAD.4 5 PLIP interactions: 5 interactions with chain B Hydrophobic interactions: B:P.311 Hydrogen bonds: B:A.316, B:A.317, B:G.318, B:Y.357

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Treiber, N. et al., Structure of 2,6-Dihydroxypyridine 3-Hydroxylase from a Nicotine-Degrading Pathway. J.Mol.Biol. (2008)

Release Date

2008-05-13

Peptides

2,6-DIHYDROXYPYRIDINE HYDROXYLASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

2,6-DIHYDROXYPYRIDINE HYDROXYLASE

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