SMTL ID : 2vv3.1 (1 other biounit)

hPPARgamma Ligand binding domain in complex with 4-oxoDHA

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.85 Å

Oligo State

monomer

Ligands

1 x 4R8: (6E,10Z,13Z,16Z,19Z)-4-oxodocosa-6,10,13,16,19-pentaenoic acid

4R8.1: 16 residues within 4Å: Chain A: G.83, C.84, R.87, S.88, H.122, Y.126, L.129, V.138, L.139, I.140, S.141, M.163, K.166, H.248, L.268, Y.272 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.129, A:V.138 Hydrogen bonds: A:Y.126, A:K.166, A:Y.272 Salt bridges: A:H.122, A:H.248

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Itoh, T. et al., Structural Basis for the Activation of Ppargamma by Oxidized Fatty Acids. Nat.Struct.Mol.Biol. (2008)

Release Date

2008-08-19

Peptides

PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA

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