SMTL ID : 2vxc.1

Structure of the Crb2-BRCT2 domain complex with phosphopeptide.

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.10 Å

Oligo State

homo-dimer

Ligands

1 x SEP- GLN- GLU- LEU: H2A1 PEPTIDE(Non-covalent)

SEP-GLN-GLU-LEU.1: 8 residues within 4Å: Chain A: S.12, G.13, R.22, S.79, R.80, K.81, V.82, K.83 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:R.80, A:K.81 Hydrogen bonds: A:S.12, A:G.13, A:R.22, A:R.80, A:R.80, A:K.81, A:V.82, A:K.83 Water bridges: A:R.22, A:K.83 Salt bridges: A:R.80, A:K.81, A:K.83

4 x PR: PRASEODYMIUM ION(Non-covalent)

PR.2: 2 residues within 4Å: Chain A: D.5, D.6 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.5, A:D.6, H2O.1 PR.3: 2 residues within 4Å: Chain A: H.123, D.126 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:H.123, A:D.126 PR.4: 3 residues within 4Å: Chain B: D.5, D.6 Ligands: PR.5 2 PLIP interactions: 2 interactions with chain B Metal complexes: B:D.5, B:D.6 PR.5: 3 residues within 4Å: Chain B: D.6, S.67 Ligands: PR.4 2 PLIP interactions: 2 interactions with chain B Metal complexes: B:D.6, B:S.67

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kilkenny, M.L. et al., Structural and Functional Analysis of the Crb2-Brct2 Domain Reveals Distinct Roles in Checkpoint Signaling and DNA Damage Repair. Genes Dev. (2008)

Release Date

2008-08-12

Peptides

DNA REPAIR PROTEIN RHP9: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

DNA REPAIR PROTEIN RHP9