SMTL ID : 2vxk.1

Structural comparison between Aspergillus fumigatus and human GNA1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

2 x 16G: 2-acetamido-2-deoxy-6-O-phosphono-alpha-D-glucopyranose(Non-covalent)

16G.1: 13 residues within 4Å: Chain A: T.70, I.128, E.129, D.130, I.131, D.165, Y.174, Y.189 Chain B: K.117, I.119, H.120, Y.160, K.161 17 PLIP interactions: 5 interactions with chain B, 12 interactions with chain A Hydrogen bonds: B:K.117, B:K.117, A:T.70, A:T.70, A:E.129, A:D.130, A:I.131, A:D.165, A:D.165, A:Y.189 Salt bridges: B:H.120, B:K.161, B:K.161 Hydrophobic interactions: A:I.131 Water bridges: A:I.128, A:E.129, A:D.165 16G.4: 13 residues within 4Å: Chain A: K.117, I.119, H.120, Y.160, K.161 Chain B: T.70, I.128, E.129, D.130, I.131, D.165, Y.174, Y.189 18 PLIP interactions: 12 interactions with chain B, 6 interactions with chain A Hydrophobic interactions: B:I.131 Hydrogen bonds: B:T.70, B:D.130, B:I.131, B:D.165, B:D.165, B:Y.174, B:Y.189, B:Y.189, A:K.117, A:K.117, A:Y.160 Water bridges: B:I.128, B:E.129, B:D.165 Salt bridges: A:H.120, A:K.161, A:K.161

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 1 residues within 4Å: Chain A: S.32 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.32 PO4.5: 1 residues within 4Å: Chain B: S.32 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:S.32

2 x COA: COENZYME A(Non-covalent)

COA.3: 15 residues within 4Å: Chain A: I.131, A.132, V.133, Q.138, G.139, K.140, K.141, L.142, G.143, L.144, A.169, N.170, G.172, F.173, K.176 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:I.131 Hydrogen bonds: A:V.133, A:Q.138, A:G.139, A:K.141, A:K.141, A:L.142, A:G.143, A:L.144, A:A.169, A:F.173 Water bridges: A:K.140, A:K.140, A:G.172 Salt bridges: A:K.141, A:K.176 COA.6: 15 residues within 4Å: Chain B: I.131, A.132, V.133, Q.138, G.139, K.140, K.141, L.142, G.143, L.144, A.169, N.170, G.172, F.173, K.176 16 PLIP interactions: 16 interactions with chain B Hydrophobic interactions: B:I.131 Hydrogen bonds: B:V.133, B:Q.138, B:G.139, B:K.141, B:K.141, B:L.142, B:G.143, B:L.144, B:A.169, B:F.173 Water bridges: B:K.140, B:K.140, B:G.172 Salt bridges: B:K.141, B:K.176

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hurtado-Guerrero, R. et al., Structural and Kinetic Differences between Human and Aspergillus Fumigatus D-Glucosamine-6- Phosphate N-Acetyltransferase. Biochem.J. (2008)

Release Date

2008-07-15

Peptides

GLUCOSAMINE 6-PHOSPHATE ACETYLTRANSFERASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

GLUCOSAMINE 6-PHOSPHATE ACETYLTRANSFERASE

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