SMTL ID : 2wcl.1

Structure of BMori GOBP2 (General Odorant Binding Protein 2) with (8E, 10Z)-hexadecadien-1-ol

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.61 Å

Oligo State

monomer

Ligands

3 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)

MG.1: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.2: 2 residues within 4Å: Chain A: D.39, E.130 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.39, H2O.1, H2O.3 MG.3: 1 residues within 4Å: Chain A: E.22 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:E.22

1 x B8M: (8E,10Z)-HEXADECA-8,10-DIEN-1-OL

B8M.4: 18 residues within 4Å: Chain A: T.9, F.12, F.33, F.36, W.37, I.52, M.62, V.66, R.67, M.73, M.90, I.94, E.98, R.110, V.111, V.114, A.115, F.118 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:F.12, A:F.12, A:F.33, A:F.33, A:F.36, A:W.37, A:I.52, A:I.94, A:V.114, A:A.115, A:F.118 Hydrogen bonds: A:V.66

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhou, J.-J. et al., Characterisation of Bombyx Mori Odorant-Binding Proteins Reveals that a General Odorant-Binding Protein Discriminates between Sex Pheromone Components. J.Mol.Biol. (2009)

Release Date

2009-08-11

Peptides

GENERAL ODORANT-BINDING PROTEIN 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

GENERAL ODORANT-BINDING PROTEIN 1

Related Entries With Identical Sequence