SMTL ID : 2we2.1

EBV dUTPase double mutant Gly78Asp-Asp131Ser with dUMP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: P.170, H.171, R.173, K.227 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:H.171 Salt bridges: A:H.171, A:R.173, A:K.227

1 x UMP: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE(Non-covalent)

UMP.2: 12 residues within 4Å: Chain A: L.68, H.79, G.81, I.82, I.83, D.84, Y.87, E.90, L.91, R.92, R.179, S.180 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:I.83, A:Y.87 Hydrogen bonds: A:I.82, A:D.84, A:R.92, A:R.92, A:S.180, A:S.180 Water bridges: A:I.82, A:I.82, A:G.178, A:R.179, A:R.179, A:R.179, A:G.181 Salt bridges: A:R.179

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Freeman, L. et al., The Flexible Motif V of Epstein-Barr Virus Deoxyuridine 5'-Triphosphate Pyrophosphatase is Essential for Catalysis. J.Biol.Chem. (2009)

Release Date

2009-07-07

Peptides

DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE