SMTL ID : 2who.2 (1 other biounit)

CRYSTAL STRUCTURE OF HEPATITIS C VIRUS NS5B POLYMERASE FROM 1B GENOTYPE IN COMPLEX WITH A NON-NUCLEOSIDE INHIBITOR

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

2 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 4 residues within 4Å: Chain A: D.220, D.318, D.319 Ligands: MN.2 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.220, A:D.318, A:D.319, H2O.10 MN.2: 4 residues within 4Å: Chain A: D.220, T.221, D.318 Ligands: MN.1 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.220, A:T.221, A:D.318, H2O.10, H2O.10

1 x VGI: 2-(3-bromophenyl)-6-[(2-hydroxyethyl)amino]-1h-benzo[de]isoquinoline-1,3(2h)-dione(Non-covalent)

VGI.3: 10 residues within 4Å: Chain A: R.422, M.423, L.474, H.475, Y.477, I.482, A.486, R.498, R.501, W.528 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:H.475, A:Y.477, A:I.482, A:W.528 Water bridges: A:L.497, A:R.498

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ontoria, J.M. et al., Identification and biological evaluation of a series of 1H-benzo[de]isoquinoline-1,3(2H)-diones as hepatitis C virus NS5B polymerase inhibitors. J. Med. Chem. (2009)

Release Date

2009-08-11

Peptides

RNA-DIRECTED RNA POLYMERASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

RNA-DIRECTED RNA POLYMERASE

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