SMTL ID : 2wne.1

Mutant Laminarinase 16A cyclizes laminariheptaose

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.12 Å

Oligo State

monomer

Ligands

1 x GLC- BGC- BGC- BGC- BGC- BGC- BGC: beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-alpha-D-glucopyranose

GLC-BGC-BGC-BGC-BGC-BGC-BGC.1: 20 residues within 4Å: Chain A: P.26, T.27, H.28, R.73, W.99, A.101, W.103, E.107, W.110, S.115, D.117, E.120, T.131, H.133, G.161, N.162, T.163, D.256, W.257, Q.260 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:D.117, A:T.131, A:N.162, A:R.73, A:W.99, A:S.115 Water bridges: A:E.120, A:N.152, A:T.163, A:N.250, A:N.250 Salt bridges: A:H.133

1 x NAG- NAG- BMA- MAN- MAN- MAN- MAN: alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN-MAN-MAN-MAN.2: 9 residues within 4Å: Chain A: N.43, Y.46, S.48, G.49, D.50, T.51, I.53, R.55, R.90 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Y.46, A:D.50, A:D.50, A:T.51 Hydrophobic interactions: A:Y.46

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vasur, J. et al., Synthesis of Cyclic Beta-Glucan Using Laminarinase 16A Glycosynthase Mutant from the Basidiomycete Phanerochaete Chrysosporium. J.Am.Chem.Soc. (2010)

Release Date

2010-01-26

Peptides

PUTATIVE LAMINARINASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PUTATIVE LAMINARINASE

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