SMTL ID : 2wq6.1

Structure of the 6-4 photolyase of D. melanogaster in complex with the non-natural N4-methyl T(Dewar)C lesion

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 31 residues within 4Å: Chain A: F.267, K.269, T.281, T.282, V.283, L.284, S.285, L.288, L.319, Q.322, L.323, W.325, R.326, Y.329, W.385, I.386, H.388, R.391, H.392, A.395, F.414, L.418, D.420, Q.421, D.422, L.425, N.426, N.429, W.430, L.433 Chain B: T.8 27 PLIP interactions: 27 interactions with chain A Hydrophobic interactions: A:R.391, A:A.395, A:F.414, A:F.414, A:N.429, A:W.430, A:L.433 Hydrogen bonds: A:K.269, A:T.281, A:T.282, A:T.282, A:V.283, A:L.284, A:S.285, A:S.285, A:H.388, A:H.388, A:R.391, A:D.420, A:D.420, A:D.422, A:N.429 Water bridges: A:S.285, A:H.388 Salt bridges: A:K.269, A:K.269 pi-Cation interactions: A:R.391

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Glas, A.F. et al., DNA (6-4) Photolyases Reduce Dewar Isomers for Isomerization Into (6-4) Lesions. J.Am.Chem.Soc. (2010)

Release Date

2010-02-23

Peptides

RE11660P: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

RE11660P

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