SMTL ID : 2wv0.2 (5 other biounits)

CRYSTAL STRUCTURE OF THE GNTR-HUTC FAMILY MEMBER YVOA FROM BACILLUS SUBTILIS

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: P.10, I.11, Y.12, T.50 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:I.11, A:Y.12 Water bridges: A:T.50, A:Q.53 SO4.2: 9 residues within 4Å: Chain A: S.88, F.89, T.90, R.133, R.135, S.164, S.165, I.166, Y.167 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:F.89, A:T.90, A:S.165, A:I.166, A:Y.167 Salt bridges: A:R.133, A:R.135 SO4.3: 4 residues within 4Å: Chain B: P.10, I.11, Y.12, T.50 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:I.11, B:Y.12, B:T.50 Water bridges: B:Q.53 SO4.4: 9 residues within 4Å: Chain B: S.88, F.89, T.90, R.133, R.135, S.164, S.165, I.166, Y.167 8 PLIP interactions: 8 interactions with chain B Hydrogen bonds: B:F.89, B:T.90, B:T.90, B:I.166, B:Y.167 Water bridges: B:R.133 Salt bridges: B:R.133, B:R.135

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Resch, M. et al., Insight Into the Induction Mechanism of the Gntr/Hutc Bacterial Transcription Regulator Yvoa. Nucleic Acids Res. (2010)

Release Date

2010-01-12

Peptides

HTH-TYPE TRANSCRIPTIONAL REPRESSOR YVOA: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

HTH-TYPE TRANSCRIPTIONAL REPRESSOR YVOA

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