SMTL ID : 2wvk.1

Mannosyl-3-phosphoglycerate synthase from Thermus thermophilus HB27 apoprotein

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.97 Å

Oligo State

homo-dimer

Ligands

1 x FLC: CITRATE ANION(Non-covalent)

FLC.1: 6 residues within 4Å: Chain A: R.30, V.31, R.32, D.33, R.42 Chain B: H.78 6 PLIP interactions: 5 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:R.32, A:R.32, A:D.33 Salt bridges: A:R.32, A:R.42, B:H.78

5 x ZN: ZINC ION(Non-covalent)

ZN.2: 3 residues within 4Å: Chain A: N.7, H.8, E.19 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.8, A:E.19, A:E.19, H2O.2 ZN.3: 3 residues within 4Å: Chain A: E.251, H.309, H.311 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.251, A:H.309, A:H.311, H2O.2 ZN.4: 3 residues within 4Å: Chain B: H.8, E.19, D.242 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:H.8, B:E.19, B:D.242, B:D.242, H2O.3 ZN.5: 3 residues within 4Å: Chain B: E.251, H.309, H.311 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:E.251, B:H.309, B:H.311 ZN.6: 2 residues within 4Å: Chain B: E.292, H.296 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:E.292, B:E.292, B:H.296

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Goncalves, S. et al., Structural Analysis of Thermus Thermophilus Hb27 Mannosyl-3-Phosphoglycerate Synthase Provides Evidence for a Second Catalytic Metal Ion and New Insight Into the Retaining Mechanism of Glycosyltransferases. J.Biol.Chem. (2010)

Release Date

2010-03-31

Peptides

MANNOSYL-3-PHOSPHOGLYCERATE SYNTHASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

MANNOSYL-3-PHOSPHOGLYCERATE SYNTHASE

Related Entries With Identical Sequence