SMTL ID : 2x5r.1

Crystal Structure of the hypothetical protein ORF126 from Pyrobaculum spherical virus

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

8 x ZN: ZINC ION(Non-covalent)

ZN.1: 1 residues within 4Å: Chain A: H.14 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.14, H2O.4, H2O.4 ZN.2: 4 residues within 4Å: Chain A: C.80, C.83, C.109, C.112 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.80, A:C.83, A:C.109, A:C.112 ZN.3: 3 residues within 4Å: Chain A: H.92, D.110, T.117 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.92, A:D.110, H2O.4 ZN.4: 5 residues within 4Å: Chain A: H.27, E.37 Chain B: H.27, E.37 Ligands: ZN.8 5 PLIP interactions: 3 interactions with chain A, 2 interactions with chain B Metal complexes: A:H.27, A:E.37, A:E.37, B:H.27, B:E.37 ZN.5: 1 residues within 4Å: Chain B: H.14 3 PLIP interactions: 1 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:H.14, H2O.7, H2O.7 ZN.6: 4 residues within 4Å: Chain B: C.80, C.83, C.109, C.112 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.80, B:C.83, B:C.109, B:C.112 ZN.7: 3 residues within 4Å: Chain B: H.92, D.110, T.117 3 PLIP interactions: 2 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:H.92, B:D.110, H2O.7 ZN.8: 5 residues within 4Å: Chain A: H.27, E.37 Chain B: H.27, E.37 Ligands: ZN.4 5 PLIP interactions: 2 interactions with chain A, 3 interactions with chain B Metal complexes: A:H.27, A:E.37, B:H.27, B:E.37, B:E.37

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Oke, M. et al., The Scottish Structural Proteomics Facility: Targets, Methods and Outputs. J.Struct.Funct.Genomics (2010)

Release Date

2010-07-28

Peptides

HYPOTHETICAL PROTEIN ORF126: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

HYPOTHETICAL PROTEIN ORF126