SMTL ID : 2xkw.1 (1 other biounit)

LIGAND BINDING DOMAIN OF HUMAN PPAR-GAMMA IN COMPLEX WITH THE AGONIST PIOGLITAZONE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.02 Å

Oligo State

monomer

Ligands

1 x P1B: (5R)-5-{4-[2-(5-ethylpyridin-2-yl)ethoxy]benzyl}-1,3-thiazolidine-2,4-dione(Non-covalent)

P1B.1: 14 residues within 4Å: Chain A: I.78, F.79, C.82, Q.83, S.86, H.120, Y.124, L.127, I.138, M.145, M.161, H.246, L.266, Y.270 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:I.78, A:I.138, A:I.138 Hydrogen bonds: A:S.86 pi-Cation interactions: A:H.246

1 x PE4: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL(Non-functional Binders)

PE4.2: 7 residues within 4Å: Chain A: G.36, K.37, T.38, T.39, D.40, K.41, S.42 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:T.38

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mueller, J.J. et al., Binding Diversity of Pioglitazone by Peroxisome Proliferator-Activated Receptor-Gamma. To be Published

Release Date

2011-08-10

Peptides

PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA

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