SMTL ID : 2xlr.1 (1 other biounit)

Joint-functions of protein residues and NADP(H) in oxygen-activation by flavin-containing monooxygenase: Asn78Asp mutant

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.55 Å

Oligo State

homo-dimer

Ligands

2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 31 residues within 4Å: Chain A: G.14, G.16, P.17, S.18, F.42, E.43, K.44, Q.45, G.50, Q.51, W.52, H.68, S.70, M.71, L.75, S.77, D.78, L.84, T.129, A.130, V.131, C.166, T.167, G.168, F.170, F.285, Q.323, S.326, F.327, F.330 Ligands: NAP.2 24 PLIP interactions: 24 interactions with chain A Hydrophobic interactions: A:L.75, A:F.170 Hydrogen bonds: A:G.16, A:S.18, A:S.18, A:K.44, A:K.44, A:Q.45, A:G.50, A:Q.51, A:Q.51, A:W.52, A:D.78, A:V.131, A:V.131, A:Q.323, A:S.326 Water bridges: A:S.18, A:G.19, A:H.169 Salt bridges: A:H.68 pi-Stacking: A:W.52, A:W.52 pi-Cation interactions: A:K.44 FAD.3: 31 residues within 4Å: Chain B: G.14, G.16, P.17, S.18, F.42, E.43, K.44, Q.45, G.50, Q.51, W.52, H.68, S.70, M.71, L.75, S.77, D.78, L.84, T.129, A.130, V.131, C.166, T.167, G.168, F.170, F.285, Q.323, S.326, F.327, F.330 Ligands: NAP.4 23 PLIP interactions: 23 interactions with chain B Hydrophobic interactions: B:L.75, B:F.170 Hydrogen bonds: B:G.16, B:S.18, B:S.18, B:K.44, B:Q.45, B:G.50, B:Q.51, B:Q.51, B:W.52, B:D.78, B:V.131, B:V.131, B:Q.323, B:S.326 Water bridges: B:S.18, B:S.18, B:G.19, B:H.169 Salt bridges: B:H.68 pi-Stacking: B:W.52 pi-Cation interactions: B:K.44

2 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.2: 22 residues within 4Å: Chain A: D.78, F.170, Y.174, P.176, F.178, V.208, G.209, S.210, S.211, Y.212, S.213, R.234, T.235, N.251, C.276, T.277, G.278, Y.279, D.322, Q.323, W.405 Ligands: FAD.1 19 PLIP interactions: 19 interactions with chain A Hydrogen bonds: A:D.78, A:S.210, A:S.210, A:S.211, A:S.213, A:S.213, A:R.234, A:T.235, A:N.251, A:G.278 Water bridges: A:S.213, A:R.234, A:R.234, A:C.276, A:Y.279, A:Y.279 Salt bridges: A:R.234 pi-Stacking: A:Y.212 pi-Cation interactions: A:R.234 NAP.4: 24 residues within 4Å: Chain B: D.78, F.170, Y.174, P.176, F.178, V.208, G.209, S.210, S.211, Y.212, S.213, R.234, T.235, N.251, C.276, T.277, G.278, Y.279, D.322, Q.323, W.324, Y.374, W.405 Ligands: FAD.3 22 PLIP interactions: 22 interactions with chain B Hydrogen bonds: B:D.78, B:S.210, B:S.210, B:S.211, B:Y.212, B:S.213, B:S.213, B:R.234, B:T.235, B:N.251, B:G.278, B:Y.374 Water bridges: B:S.210, B:S.213, B:R.234, B:C.276, B:Y.279, B:Y.279 Salt bridges: B:R.234 pi-Stacking: B:Y.212, B:W.324 pi-Cation interactions: B:R.234

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Orru, R. et al., Joint functions of protein residues and NADP(H) in oxygen activation by flavin-containing monooxygenase. J. Biol. Chem. (2010)

Release Date

2010-09-15

Peptides

FLAVIN-CONTAINING MONOOXYGENASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

FLAVIN-CONTAINING MONOOXYGENASE

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