SMTL ID : 2xq0.1

Structure of yeast LTA4 hydrolase in complex with Bestatin

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.96 Å

Oligo State

monomer

Ligands

1 x BES: 2-(3-AMINO-2-HYDROXY-4-PHENYL-BUTYRYLAMINO)-4-METHYL-PENTANOIC ACID(Non-covalent)

BES.1: 13 residues within 4Å: Chain A: E.147, Y.273, G.274, G.275, M.276, E.277, H.301, E.302, H.305, F.320, E.324, Y.390 Ligands: ZN.2 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:E.147, A:Y.273, A:H.301, A:F.320, A:Y.390 Hydrogen bonds: A:G.274, A:G.275, A:G.275, A:E.277, A:E.277, A:Y.390 Water bridges: A:R.588, A:R.588 Salt bridges: A:R.588

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 4 residues within 4Å: Chain A: H.301, H.305, E.324 Ligands: BES.1 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.301, A:H.305, A:E.324, A:E.324

4 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 3 residues within 4Å: Chain A: P.3, S.5, I.6 Ligand excluded by PLIP CL.4: 5 residues within 4Å: Chain A: E.78, V.79, H.80, N.115, Q.117 Ligand excluded by PLIP CL.5: 1 residues within 4Å: Chain A: M.1 Ligand excluded by PLIP CL.6: 3 residues within 4Å: Chain A: Y.439, P.440, E.441 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Helgstrand, C. et al., A Leukotriene A(4) Hydrolase-Related Aminopeptidase from Yeast Undergoes Induced Fit Upon Inhibitor Binding. J.Mol.Biol. (2011)

Release Date

2010-12-29

Peptides

LEUKOTRIENE A-4 HYDROLASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

LEUKOTRIENE A-4 HYDROLASE