SMTL ID : 2xs7.1

Crystal structure of the RRM domain of mouse Deleted in azoospermia- like in complex with Sycp3 RNA, UUGUUU

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.45 Å

Oligo State

monomer

Ligands

1 x U- G- U- U- U: 5'-R(*UP*UP*GP*UP*UP*UP)-3'(Non-covalent)

U-G-U-U-U.1: 14 residues within 4Å: Chain A: M.8, T.11, F.13, I.42, Y.52, F.54, K.79, L.80, G.81, P.82, A.83, I.84, R.85, K.86 Protein-ligand interaction information (PLIP) not available

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 2 residues within 4Å: Chain A: E.25, H.74 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.25, A:E.25, A:H.74, H2O.4

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jenkins, H.T. et al., Kinked Beta-Strands Mediate High-Affinity Recognition of Mrna Targets by the Germ-Cell Regulator Dazl. Proc.Natl.Acad.Sci.USA (2011)

Release Date

2011-10-05

Peptides

DELETED IN AZOOSPERMIA-LIKE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DELETED IN AZOOSPERMIA-LIKE

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