SMTL ID : 2xvh.1 (1 other biounit)

CRYSTAL STRUCTURE OF BACTERIAL FLAVIN CONTAINING MONOOXYGENASE IN COMPLEX WITH NADP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.54 Å

Oligo State

homo-dimer

Ligands

2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 31 residues within 4Å: Chain A: G.9, G.11, P.12, S.13, F.37, E.38, K.39, Q.40, G.45, Q.46, W.47, H.63, S.65, M.66, L.70, S.72, N.73, L.79, T.124, A.125, V.126, C.161, T.162, G.163, F.165, F.280, Q.318, S.321, F.322, F.325 Ligands: NAP.2 27 PLIP interactions: 27 interactions with chain A Hydrophobic interactions: A:L.70, A:F.165 Hydrogen bonds: A:A.10, A:G.11, A:S.13, A:S.13, A:G.14, A:K.39, A:Q.40, A:Q.46, A:Q.46, A:W.47, A:N.73, A:V.126, A:V.126, A:Q.318, A:S.321, A:S.321 Water bridges: A:S.13, A:S.13, A:G.45, A:H.164, A:F.165, A:S.321 Salt bridges: A:H.63 pi-Stacking: A:W.47 pi-Cation interactions: A:K.39 FAD.3: 31 residues within 4Å: Chain B: G.9, G.11, P.12, S.13, F.37, E.38, K.39, Q.40, G.45, Q.46, W.47, H.63, S.65, M.66, L.70, S.72, N.73, L.79, T.124, A.125, V.126, C.161, T.162, G.163, F.165, F.280, Q.318, S.321, F.322, F.325 Ligands: NAP.5 23 PLIP interactions: 23 interactions with chain B Hydrophobic interactions: B:F.165 Hydrogen bonds: B:S.13, B:S.13, B:S.13, B:K.39, B:Q.40, B:G.45, B:Q.46, B:Q.46, B:W.47, B:N.73, B:V.126, B:V.126, B:S.321, B:S.321 Water bridges: B:G.11, B:G.14, B:G.163, B:H.164 Salt bridges: B:H.63 pi-Stacking: B:W.47, B:W.47 pi-Cation interactions: B:K.39

2 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.2: 25 residues within 4Å: Chain A: Y.67, L.70, W.71, N.73, F.165, Y.169, P.171, F.173, V.203, G.204, S.205, S.206, Y.207, S.208, D.211, R.229, T.230, N.246, C.271, T.272, G.273, Y.274, N.291, R.412 Ligands: FAD.1 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:D.211 Hydrogen bonds: A:Y.67, A:W.71, A:N.73, A:N.73, A:S.205, A:S.206, A:S.208, A:R.229, A:T.230, A:N.246, A:N.291, A:R.412 Water bridges: A:S.206, A:S.208, A:S.208, A:Y.274 Salt bridges: A:R.229 pi-Cation interactions: A:R.229 NAP.5: 24 residues within 4Å: Chain B: Y.67, L.70, W.71, N.73, F.165, Y.169, P.171, F.173, V.203, S.205, S.206, Y.207, S.208, D.211, R.229, T.230, N.246, C.271, T.272, G.273, Y.274, N.291, R.412 Ligands: FAD.3 20 PLIP interactions: 20 interactions with chain B Hydrophobic interactions: B:D.211 Hydrogen bonds: B:W.71, B:N.73, B:N.73, B:S.205, B:S.205, B:S.205, B:S.205, B:S.206, B:S.208, B:S.208, B:T.230, B:N.246, B:N.291, B:R.412 Water bridges: B:N.73, B:S.206, B:A.209 Salt bridges: B:R.229 pi-Cation interactions: B:R.229

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 3 residues within 4Å: Chain B: I.120, R.121, F.122 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:F.122 Water bridges: B:F.122

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cho, H.J. et al., Structural and Functional Analysis of Bacterial Flavin-Containing Monooxygenase Reveals its Ping-Pong-Type Reaction Mechanism. J.Struct.Biol. (2011)

Release Date

2011-05-04

Peptides

FLAVIN-CONTAINING MONOOXYGENASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

FLAVIN-CONTAINING MONOOXYGENASE

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