SMTL ID : 2xye.1

HIV-1 Inhibitors with a Tertiary-Alcohol-containing Transition-State Mimic and various P2 and P1 prime Substituents

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

1 x CXG: METHYL N-[(2S)-1-[2-[(4R)-5-[[(2S)-3,3-DIMETHYL-1-METHYLAMINO-1-OXO-BUTAN-2-YL]AMINO]-4-HYDROXY-5-OXO-4-(PHENYLMETHYL)PENTYL]-2-[(4-PHENYLPHENYL)METHYL]HYDRAZINYL]-3,3-DIMETHYL-1-OXO-BUTAN-2-YL]CARBAMATE(Non-covalent)

CXG.1: 24 residues within 4Å: Chain A: D.25, G.27, A.28, D.29, D.30, I.47, G.48, G.49, I.50, P.81, T.82 Chain B: R.8, L.23, D.25, G.27, A.28, D.29, I.47, G.48, G.49, I.50, F.53, P.81, T.82 24 PLIP interactions: 12 interactions with chain A, 12 interactions with chain B Hydrophobic interactions: A:A.28, A:I.47, A:P.81, A:P.81, A:T.82, B:L.23, B:A.28, B:I.47, B:I.50, B:I.50, B:F.53, B:P.81, B:T.82 Hydrogen bonds: A:D.25, A:G.27, A:D.29, A:G.48, B:G.27, B:D.29, B:G.48 Water bridges: A:G.48, A:I.50, B:I.50 Salt bridges: A:D.25

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ohrngren, P. et al., HIV-1 Protease Inhibitors with a Tertiary Alcohol Containing Transition-State Mimic and Various P2 and P1' Substituents. Med.Chem.Commun. (2011)

Release Date

2011-12-07

Peptides

PROTEASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

PROTEASE

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