- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.06 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x ZA4: [(2-FLUOROPHENYL)CARBONYLAMINO]METHYL-TRIHYDROXY-BORON(Covalent)
- 2 x SO4: SULFATE ION(Non-functional Binders)
SO4.2: 3 residues within 4Å:- Chain A: T.266, Q.269, K.286
8 PLIP interactions:8 interactions with chain A- Water bridges: A:K.158, A:Q.269, A:K.286, A:K.286, A:K.286, A:K.286
- Salt bridges: A:K.158, A:K.286
SO4.21: 3 residues within 4Å:- Chain B: T.266, Q.269, K.286
9 PLIP interactions:9 interactions with chain B- Hydrogen bonds: B:T.266
- Water bridges: B:K.158, B:Q.269, B:K.286, B:K.286, B:K.286, B:K.286
- Salt bridges: B:K.158, B:K.286
- 30 x CL: CHLORIDE ION(Non-functional Binders)
CL.3: 2 residues within 4Å:- Chain A: R.232
- Chain B: R.232
Ligand excluded by PLIPCL.4: 3 residues within 4Å:- Chain A: V.236, V.238, K.239
Ligand excluded by PLIPCL.5: 3 residues within 4Å:- Chain A: S.328, R.330, K.336
Ligand excluded by PLIPCL.6: 4 residues within 4Å:- Chain A: A.294, A.295, D.296, R.298
Ligand excluded by PLIPCL.7: 3 residues within 4Å:- Chain A: S.429, E.430, K.438
Ligand excluded by PLIPCL.8: 4 residues within 4Å:- Chain A: Y.247, E.248, V.265, Q.269
Ligand excluded by PLIPCL.9: 4 residues within 4Å:- Chain A: E.49, H.287, V.288, I.289
Ligand excluded by PLIPCL.10: 5 residues within 4Å:- Chain A: D.40, Y.41, L.42, H.102, Q.106
Ligand excluded by PLIPCL.11: 2 residues within 4Å:- Chain A: S.312, K.313
Ligand excluded by PLIPCL.12: 5 residues within 4Å:- Chain A: Y.10, D.12, I.97, D.98, Q.99
Ligand excluded by PLIPCL.13: 5 residues within 4Å:- Chain A: L.432, K.433, S.434, G.453, S.454
Ligand excluded by PLIPCL.14: 4 residues within 4Å:- Chain A: Y.41, F.44, T.45, N.152
Ligand excluded by PLIPCL.15: 1 residues within 4Å:- Chain A: R.61
Ligand excluded by PLIPCL.18: 2 residues within 4Å:- Chain A: T.334, S.337
Ligand excluded by PLIPCL.19: 5 residues within 4Å:- Chain A: N.195, N.197
- Chain B: N.195, N.197
- Ligands: CL.38
Ligand excluded by PLIPCL.22: 2 residues within 4Å:- Chain A: R.232
- Chain B: R.232
Ligand excluded by PLIPCL.23: 3 residues within 4Å:- Chain B: V.236, V.238, K.239
Ligand excluded by PLIPCL.24: 3 residues within 4Å:- Chain B: S.328, R.330, K.336
Ligand excluded by PLIPCL.25: 4 residues within 4Å:- Chain B: A.294, A.295, D.296, R.298
Ligand excluded by PLIPCL.26: 3 residues within 4Å:- Chain B: S.429, E.430, K.438
Ligand excluded by PLIPCL.27: 4 residues within 4Å:- Chain B: Y.247, E.248, V.265, Q.269
Ligand excluded by PLIPCL.28: 4 residues within 4Å:- Chain B: E.49, H.287, V.288, I.289
Ligand excluded by PLIPCL.29: 5 residues within 4Å:- Chain B: D.40, Y.41, L.42, H.102, Q.106
Ligand excluded by PLIPCL.30: 2 residues within 4Å:- Chain B: S.312, K.313
Ligand excluded by PLIPCL.31: 5 residues within 4Å:- Chain B: Y.10, D.12, I.97, D.98, Q.99
Ligand excluded by PLIPCL.32: 5 residues within 4Å:- Chain B: L.432, K.433, S.434, G.453, S.454
Ligand excluded by PLIPCL.33: 4 residues within 4Å:- Chain B: Y.41, F.44, T.45, N.152
Ligand excluded by PLIPCL.34: 1 residues within 4Å:- Chain B: R.61
Ligand excluded by PLIPCL.37: 2 residues within 4Å:- Chain B: T.334, S.337
Ligand excluded by PLIPCL.38: 5 residues within 4Å:- Chain A: N.195, N.197
- Chain B: N.195, N.197
- Ligands: CL.19
Ligand excluded by PLIP- 2 x NA: SODIUM ION(Non-functional Binders)
NA.16: 4 residues within 4Å:- Chain A: T.355, G.356, T.357
- Ligands: ZA4.1
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:S.219, A:T.355
- Water bridges: A:T.355
NA.35: 4 residues within 4Å:- Chain B: T.355, G.356, T.357
- Ligands: ZA4.20
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:S.219, B:T.355, B:T.355, B:T.357
- 2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.17: 4 residues within 4Å:- Chain A: E.183, L.322, E.325, Y.459
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:E.325
- Water bridges: A:S.182, A:L.322
EDO.36: 4 residues within 4Å:- Chain B: E.183, L.322, E.325, Y.459
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:E.325
- Water bridges: B:S.182, B:E.183, B:L.322
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Contreras-Martel, C. et al., Structure-Guided Design of Cell Wall Biosynthesis Inhibitors that Overcome Beta-Lactam Resistance in Staphylococcus Aureus (Mrsa). Acs Chem.Biol (2011)
- Release Date
- 2011-08-03
- Peptides
- PENICILLIN-BINDING PROTEIN 1B: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.06 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x ZA4: [(2-FLUOROPHENYL)CARBONYLAMINO]METHYL-TRIHYDROXY-BORON(Covalent)
- 2 x SO4: SULFATE ION(Non-functional Binders)
- 30 x CL: CHLORIDE ION(Non-functional Binders)
- 2 x NA: SODIUM ION(Non-functional Binders)
- 2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Contreras-Martel, C. et al., Structure-Guided Design of Cell Wall Biosynthesis Inhibitors that Overcome Beta-Lactam Resistance in Staphylococcus Aureus (Mrsa). Acs Chem.Biol (2011)
- Release Date
- 2011-08-03
- Peptides
- PENICILLIN-BINDING PROTEIN 1B: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A