SMTL ID : 2y7k.1 (1 other biounit)

DNTR INDUCER BINDING DOMAIN IN COMPLEX WITH SALICYLATE. MONOCLINIC CRYSTAL FORM

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

homo-dimer

Ligands

4 x SAL: 2-HYDROXYBENZOIC ACID(Non-covalent)

SAL.1: 11 residues within 4Å: Chain A: T.15, I.17, G.18, Y.21, F.22, G.63, F.78, H.80, H.117, P.157, I.184 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:I.17, A:Y.21, A:F.22, A:F.78, A:I.184 Water bridges: A:T.15, A:T.15, A:L.64, A:L.64 Salt bridges: A:H.117 pi-Stacking: A:Y.21 SAL.2: 8 residues within 4Å: Chain A: D.2, P.3, S.6, F.10, I.37, P.196, G.197, W.200 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:P.3, A:F.10, A:I.37, A:W.200, A:W.200 Hydrogen bonds: A:D.2 SAL.3: 10 residues within 4Å: Chain B: T.15, I.17, G.18, Y.21, F.22, F.78, H.80, H.117, P.157, I.184 10 PLIP interactions: 10 interactions with chain B Hydrophobic interactions: B:I.17, B:Y.21, B:Y.21, B:F.22, B:F.78, B:I.184 Water bridges: B:T.15, B:L.64, B:L.64 Salt bridges: B:H.117 SAL.4: 6 residues within 4Å: Chain B: P.3, S.6, R.8, P.196, G.197, W.200 2 PLIP interactions: 2 interactions with chain B Hydrophobic interactions: B:W.200 Salt bridges: B:R.8

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Devesse, L. et al., Crystal Structures of Dntr Inducer Binding Domains in Complex with Salicylate Offer Insights Into the Activation of Lysr-Type Transcriptional Regulators. Mol.Microbiol. (2011)

Release Date

2011-07-20

Peptides

LYSR-TYPE REGULATORY PROTEIN: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

LYSR-TYPE REGULATORY PROTEIN

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