SMTL ID : 2yan.1 (1 other biounit)

Crystal structure of the second glutaredoxin domain of human TXNL2

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 1 residues within 4Å: Chain A: K.90 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.90 EDO.2: 4 residues within 4Å: Chain A: K.65, N.69, W.70, P.71 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.69 EDO.3: 3 residues within 4Å: Chain A: C.32, K.36 Ligands: GSH.8 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.36 Water bridges: A:C.32 EDO.4: 3 residues within 4Å: Chain A: K.27, E.50, T.51 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.27, A:T.51 Water bridges: A:D.53

1 x FE: FE (III) ION(Non-covalent)

FE.5: 1 residues within 4Å: Chain A: F.34 No protein-ligand interaction detected (PLIP)

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.6: 4 residues within 4Å: Chain A: K.24, K.31, L.55, R.61 3 PLIP interactions: 3 interactions with chain A Salt bridges: A:K.24, A:K.31, A:R.61

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.7: 5 residues within 4Å: Chain A: W.70, G.85, L.86, D.87, I.88 Ligand excluded by PLIP

1 x GSH: GLUTATHIONE(Non-covalent)

GSH.8: 3 residues within 4Å: Chain A: C.32, G.33 Ligands: EDO.3 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vollmar, M. et al., Crystal Structure of the Second Glutaredoxin Domain of Human Txnl2. To be Published

Release Date

2011-11-30

Peptides

GLUTAREDOXIN-3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

GLUTAREDOXIN-3

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