SMTL ID : 2yax.1

IODOACETAMIDE INHIBITED SULFUR OXYGENASE REDUCTASE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-24-mer

Ligands

24 x FE: FE (III) ION(Non-covalent)

FE.1: 3 residues within 4Å: Chain A: H.86, H.90, E.114 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.86, A:H.90, A:E.114, H2O.1, H2O.1 FE.2: 3 residues within 4Å: Chain B: H.86, H.90, E.114 5 PLIP interactions: 3 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:H.86, B:H.90, B:E.114, H2O.4, H2O.4 FE.3: 3 residues within 4Å: Chain C: H.86, H.90, E.114 5 PLIP interactions: 3 interactions with chain C, 2 Ligand-Water interactions Metal complexes: C:H.86, C:H.90, C:E.114, H2O.7, H2O.8 FE.4: 3 residues within 4Å: Chain D: H.86, H.90, E.114 5 PLIP interactions: 3 interactions with chain D, 2 Ligand-Water interactions Metal complexes: D:H.86, D:H.90, D:E.114, H2O.10, H2O.11 FE.5: 3 residues within 4Å: Chain E: H.86, H.90, E.114 5 PLIP interactions: 3 interactions with chain E, 2 Ligand-Water interactions Metal complexes: E:H.86, E:H.90, E:E.114, H2O.13, H2O.14 FE.6: 3 residues within 4Å: Chain F: H.86, H.90, E.114 6 PLIP interactions: 4 interactions with chain F, 2 Ligand-Water interactions Metal complexes: F:H.86, F:H.90, F:E.114, F:E.114, H2O.16, H2O.17 FE.7: 3 residues within 4Å: Chain G: H.86, H.90, E.114 5 PLIP interactions: 3 interactions with chain G, 2 Ligand-Water interactions Metal complexes: G:H.86, G:H.90, G:E.114, H2O.19, H2O.20 FE.8: 3 residues within 4Å: Chain H: H.86, H.90, E.114 5 PLIP interactions: 3 interactions with chain H, 2 Ligand-Water interactions Metal complexes: H:H.86, H:H.90, H:E.114, H2O.23, H2O.23 FE.9: 3 residues within 4Å: Chain I: H.86, H.90, E.114 5 PLIP interactions: 3 interactions with chain I, 2 Ligand-Water interactions Metal complexes: I:H.86, I:H.90, I:E.114, H2O.26, H2O.26 FE.10: 3 residues within 4Å: Chain J: H.86, H.90, E.114 5 PLIP interactions: 3 interactions with chain J, 2 Ligand-Water interactions Metal complexes: J:H.86, J:H.90, J:E.114, H2O.29, H2O.29 FE.11: 3 residues within 4Å: Chain K: H.86, H.90, E.114 5 PLIP interactions: 3 interactions with chain K, 2 Ligand-Water interactions Metal complexes: K:H.86, K:H.90, K:E.114, H2O.32, H2O.32 FE.12: 3 residues within 4Å: Chain L: H.86, H.90, E.114 6 PLIP interactions: 4 interactions with chain L, 2 Ligand-Water interactions Metal complexes: L:H.86, L:H.90, L:E.114, L:E.114, H2O.35, H2O.35 FE.13: 3 residues within 4Å: Chain M: H.86, H.90, E.114 5 PLIP interactions: 3 interactions with chain M, 2 Ligand-Water interactions Metal complexes: M:H.86, M:H.90, M:E.114, H2O.38, H2O.38 FE.14: 3 residues within 4Å: Chain N: H.86, H.90, E.114 5 PLIP interactions: 3 interactions with chain N, 2 Ligand-Water interactions Metal complexes: N:H.86, N:H.90, N:E.114, H2O.41, H2O.41 FE.15: 3 residues within 4Å: Chain O: H.86, H.90, E.114 5 PLIP interactions: 3 interactions with chain O, 2 Ligand-Water interactions Metal complexes: O:H.86, O:H.90, O:E.114, H2O.44, H2O.44 FE.16: 3 residues within 4Å: Chain P: H.86, H.90, E.114 5 PLIP interactions: 3 interactions with chain P, 2 Ligand-Water interactions Metal complexes: P:H.86, P:H.90, P:E.114, H2O.47, H2O.47 FE.17: 3 residues within 4Å: Chain Q: H.86, H.90, E.114 5 PLIP interactions: 3 interactions with chain Q, 2 Ligand-Water interactions Metal complexes: Q:H.86, Q:H.90, Q:E.114, H2O.50, H2O.50 FE.18: 3 residues within 4Å: Chain R: H.86, H.90, E.114 6 PLIP interactions: 4 interactions with chain R, 2 Ligand-Water interactions Metal complexes: R:H.86, R:H.90, R:E.114, R:E.114, H2O.53, H2O.53 FE.19: 3 residues within 4Å: Chain S: H.86, H.90, E.114 5 PLIP interactions: 3 interactions with chain S, 2 Ligand-Water interactions Metal complexes: S:H.86, S:H.90, S:E.114, H2O.56, H2O.56 FE.20: 3 residues within 4Å: Chain T: H.86, H.90, E.114 5 PLIP interactions: 3 interactions with chain T, 2 Ligand-Water interactions Metal complexes: T:H.86, T:H.90, T:E.114, H2O.59, H2O.60 FE.21: 3 residues within 4Å: Chain U: H.86, H.90, E.114 5 PLIP interactions: 3 interactions with chain U, 2 Ligand-Water interactions Metal complexes: U:H.86, U:H.90, U:E.114, H2O.62, H2O.63 FE.22: 3 residues within 4Å: Chain V: H.86, H.90, E.114 5 PLIP interactions: 3 interactions with chain V, 2 Ligand-Water interactions Metal complexes: V:H.86, V:H.90, V:E.114, H2O.65, H2O.66 FE.23: 3 residues within 4Å: Chain W: H.86, H.90, E.114 5 PLIP interactions: 3 interactions with chain W, 2 Ligand-Water interactions Metal complexes: W:H.86, W:H.90, W:E.114, H2O.68, H2O.69 FE.24: 3 residues within 4Å: Chain X: H.86, H.90, E.114 6 PLIP interactions: 4 interactions with chain X, 2 Ligand-Water interactions Metal complexes: X:H.86, X:H.90, X:E.114, X:E.114, H2O.71, H2O.72

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Veith, A. et al., Substrate Pathways and Mechanisms of Inhibition in the Sulfur Oxygenase Reductase of Acidianus Ambivalens. Front.Microbiol. (2011)

Release Date

2011-12-21

Peptides

SULFUR OXYGENASE/REDUCTASE: ABCDEFGHIJKLMNOPQRSTUVWX

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
A

H
B

I
C

J
D

K
E

L
F

M
A

N
B

O
C

P
D

Q
E

R
F

S
A

T
B

U
C

V
D

W
E

X
F

SULFUR OXYGENASE/REDUCTASE

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