SMTL ID : 2yek.1 (1 other biounit)

Crystal Structure of the First Bromodomain of Human Brd2 with the inhibitor GSK525762 (IBET)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.98 Å

Oligo State

homo-dimer

Ligands

2 x EAM: 2-[(4S)-6-(4-CHLOROPHENYL)-8-METHOXY-1-METHYL-4H-[1,2,4]TRIAZOLO[4,3-A][1,4]BENZODIAZEPIN-4-YL]-N-ETHYLACETAMIDE(Non-covalent)

EAM.1: 9 residues within 4Å: Chain A: W.51, P.52, F.53, V.57, L.62, L.64, Y.109, N.110, I.116 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:W.51, A:P.52, A:F.53, A:V.57, A:L.62, A:L.62, A:L.64, A:L.64, A:Y.109, A:I.116 Hydrogen bonds: A:N.110 Water bridges: A:N.110 EAM.2: 10 residues within 4Å: Chain B: W.51, P.52, F.53, V.57, L.62, L.64, Y.109, N.110, D.115, I.116 12 PLIP interactions: 12 interactions with chain B Hydrophobic interactions: B:W.51, B:P.52, B:P.52, B:F.53, B:V.57, B:L.62, B:L.64, B:Y.109, B:I.116 Hydrogen bonds: B:N.110 Water bridges: B:Y.67, B:N.110

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chung, C.W. et al., Discovery and Characterization of Small Molecule Inhibitors of the Bet Family Bromodomains. J.Med.Chem. (2011)

Release Date

2011-06-15

Peptides

BROMODOMAIN-CONTAINING PROTEIN 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

BROMODOMAIN-CONTAINING PROTEIN 2

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