SMTL ID : 2yhn.1

The IDOL-UBE2D complex mediates sterol-dependent degradation of the LDL receptor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

homo-dimer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: C.21, V.23, C.24, C.42, C.45 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.21, A:C.24, A:C.42, A:C.45 ZN.2: 4 residues within 4Å: Chain A: C.36, H.38, C.52, C.55 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.36, A:H.38, A:C.52, A:C.55 ZN.3: 6 residues within 4Å: Chain B: C.21, V.23, C.24, E.27, C.42, C.45 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.21, B:C.24, B:C.42, B:C.45 ZN.4: 4 residues within 4Å: Chain B: C.36, H.38, C.52, C.55 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.36, B:H.38, B:C.52, B:C.55

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, L. et al., The Idol-Ube2D Complex Mediates Sterol-Dependent Degradation of the Ldl Receptor. Genes Dev. (2011)

Release Date

2011-06-29

Peptides

E3 UBIQUITIN-PROTEIN LIGASE MYLIP: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

E3 UBIQUITIN-PROTEIN LIGASE MYLIP

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